ZIH-Publikationen 2012
ZIH-IR-1257 | O. Krzikalla, K. Feldhoff, R. Müller-Pfefferkorn, Wolfgang E. Nagel Auto-Vectorization Techniques for Modern SIMD Architectures In Proceedings of the 16th Workshop on Compilers for Parallel Computing (CPC 2012), 2012 |
ZIH-IR-1256 | A. Basermann, H. Kersken, A. Schreiber, T. Gerhold, J. Jägersküpper, N. Kroll, J. Backhaus, E. Kügeler, T. Alrutz, C. Simmendinger, K. Feldhoff, O. Krzikalla, R. Müller-Pfefferkorn, M. Puetz, P. Aumann, O. Knobloch, J. Hunger, C. Zscherp HICFD: Highly Efficient Implementation of CFD Codes for HPC Many-Core Architectures In Competence in High Performance Computing 2010, DOI: 10.1007/978-3-642-24025-6_1, Springer, 2012 |
ZIH-IR-1255 | C. Kartsaklis, O. Hernandez, C. Hsu, T. Ilsche, W. Joubert, R. Graham HERCULES: A Pattern Driven Code Transformation System In IPDPS Workshops, 2012 |
ZIH-IR-1254 | H. Brunst, M. Weber Custom Hot Spot Analysis of HPC Software with the Vampir Performance Tool Suite In Proceedings of the 6th International Parallel Tools Workshop, Springer Berlin Heidelberg, 2012 |
ZIH-IR-1253 | C. Löschen, R. Müller-Pfefferkorn Providing Grid Data Access on SRM and LFC to UNICORE In UNICORE Summit 2012, Proceeedings, 30-31 May 2012 | Dresden, Germany, 15, IAS Series, ISBN: 978-3-89336-829-7, ISSN: 1868-8489, Forschungszentrum Jülich GmbH Zentralbibliothek, Verlag, 2012 |
ZIH-IR-1252 | M. Weber, R. Brendel, H. Brunst Trace File Comparison with a Hierarchical Sequence Alignment Algorithm In Proceedings of the 2012 IEEE 10th International Symposium on Parallel and Distributed Processing with Applications, ISPA '12, DOI: 10.1109/ISPA.2012.40, 2012 |
ZIH-IR-1251 | G. Juckeland Trace-Based Performance Analysis for Hardware Accelerators In Seiten 93-104, ISBN: 978-3-642-31475-9, DOI: 10.1007/978-3-642-31476-6_8, Springer Berlin Heidelberg, 2012 |
ZIH-IR-1250 | J. Protze, T. Hilbrich, A. Knüpfer, B. R. de Supinski, M. S. Müller Holistic Debugging of MPI Derived Datatypes In Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium, Serie: IPDPS '12, Seiten: 354-365, IEEE Computer Society, Washington, DC, USA , 2012 |
ZIH-IR-1249 | J. Starruss, F Peruani, V. Jakovljevic, L. Sogaard-Andersen, A. Deutsch, M. Bär Pattern-formation mechanisms in motility mutants of Myxococcus xanthus In Journal: Interface Focus, Band: 2, Nr: 6, Seiten: 774 - 785, ISSN: 2042-8898, 2042-8901, 2012 |
ZIH-IR-1248 | K. Bruhm, M. F. Buchroithner, B. Hetze, M. Gindele True-3D Visualization of Glacier Retreat in the Dachstein Massif, Austria: Hard- and Softcopy Displays In True-3D in Cartography - Autostereoscopic and Solid Visualisation of Geodata, pages 105-117, 2012 |
ZIH-IR-1247 | M. F. Buchroithner, G. Ehlers, B. Hetze, H. Kohlschmidt, N. Prechtel Ein Systemprototyp zur Unterstützung der Bergrettung auf Basis einer Interaktion zwischen GPS-Tracking und einem digitalen 3D-Felswandmodell In Publikationen der Deutschen Gesellschaft für Photogrammetrie, Fernerkundung und Geoinformation (DGPF) e.V, Vol. 21, pages 256-265, 2012 |
[23] | A. Knüpfer, C. Rössel, D. an Mey, S. Biersdorff, K. Diethelm, D. Eschweiler, M. Geimer, M. Gerndt, D. Lorenz, A. Malony, Wolfgang E. Nagel, Y. Oleynik, P. Philippen, P. Saviankou, D. Schmidl, S. Shende, R. Tschüter, M. Wagner, B. Wesarg, F. Wolf Score-P: A Joint Performance Measurement Run-Time Infrastructure for Periscope, Scalasca, TAU, and Vampir In Tools for High Performance Computing 2011, DOI: 10.1007/978-3-642-31476-6\_7, Springer Berlin Heidelberg, 2012 |
[22] | D. an Mey, S. Biersdorff, C. Bischof, K. Diethelm, D. Eschweiler, M. Gerndt, A. Knüpfer, D. Lorenz, A. Malony, Wolfgang E. Nagel, Y. Oleynik, C. Rössel, P. Saviankou, D. Schmidl, S. Shende, M. Wagner, B. Wesarg, F. Wolf Score-P: A Unified Performance Measurement System for Petascale Applications In Competence in High Performance Computing 2010, DOI: 10.1007/978-3-642-24025-6\_8, Springer Berlin Heidelberg, 2012 |
ZIH-IR-1246 | S. Srivastava, N. Sukhija, I. Banicescu, F. Ciorba Analyzing the Robustness of Dynamic Loop Scheduling for Heterogeneous Computing Systems In 11th International Symposium on Parallel and Distributed Computing (ISPDC 2012), IEEE, 2012 |
ZIH-IR-1245 | L. Schäfer, J. Klump, H. Enke, J. Klar, K. Köhler, D. Koudela, R. Müller-Pfefferkorn, S. Strathmann, J. Ludwig, C. Engelhardt, T. Rathmann, D. van Uytvanck, V. Plaga, M. Lautenschlager, H. Neuroth, P. Wittenburg Requirements for a multi-disciplinary Reseach Data Infrastructure 2012 |
ZIH-IR-1244 | R. Jäkel, S. Metzger, J. Milad Daivandy, K. Hose, D. Hünich, R. Schenkel, B. Schuller Interactive Information Extraction based on Distributed Data Management for D-Grid Projects In Proceedings of "EGI Community Forum 2012 / EMI Second Technical Conference", Nr. PoS(EGICF12-EMITC2)031, Munich, Germany , 2012 |
ZIH-IR-1243 | F. Rost, A. Quintero, M. Myllykoski, A. Igolkin, A. Rohde O’Sullivan Freltoft, N. Dixit Morphogenesis and Dynamics of Multicellular Systems In ECMI Newsletter, Nr.: 52V , 2012 |
ZIH-IR-1242 | L. Packschies, G. Birkenheuer, D. Blunk, S. Breuers, A. Brinkmann, L. de la Garza, I. Dos Santos Vieira, G. Fels, S. Gesing, R. Grunzke, S. Herres-Pawlis, O. Kohlbacher, J. Krüger, M. Kruse, U. Lang, R. Müller-Pfefferkorn, P. Schäfer, T. Schlemmer, C. Schärfe, T. Steinke, K. Warzecha, A. Zink The MoSGrid-e-Science Gateway: Molecular Simulations in a Distributed Computing Environment In GCC , 2012 |
ZIH-IR-1241 | S. Gesing, S. Herres-Pawlis, G. Birkenheuer, A. Brinkmann, R. Grunzke, P. Kacsuk, O. Kohlbacher, M. Kozlovszky, J. Krüger, R. Müller-Pfefferkorn, P. Schäfer, T. Steinke A Science Gateway Getting Ready for Serving the International Molecular Simulation Community In Vol. PoS (EGICF12-EMITC2)050, 2012 |
ZIH-IR-1240 | D. Eschweiler, M. Wagner, M. Geimer, A. Knüpfer, Wolfgang E. Nagel, F. Wolf Open Trace Format 2: The Next Generation of Scalable Trace Formats and Support Libraries In Vol. 22, Advances in Parallel Computing, pages 481 - 490, ISBN: 978-1-61499-040-6, DOI: 10.3233/978-1-61499-041-3-481, 2012 |
ZIH-IR-1239 | M. Wagner, A. Knüpfer, Wolfgang E. Nagel Enhanced Encoding Techniques for the Open Trace Format 2 In Procedia Computer Science, Vol. 9, pages 1979 - 1987, ISSN: 1877-0509, DOI: 10.1016/j.procs.2012.04.216, 2012 |
ZIH-IR-1237 | M. Balasubramanian, N. Sukhija, F. Ciorba, I. Banicescu, S. Srivastava Towards the Scalability of Dynamic Loop Scheduling Techniques via Discrete Event Simulation In Proceedings of the 26th IEEE International Parallel & Distributed Processing Symposium Workshops (IPDPSW) and 13th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC12), 2012 |
ZIH-IR-1236 | F. Ciorba, T. Hansen, S. Srivastava, I. Banicescu, A. Maciejewski, H. Siegel A Combined Dual-stage Framework for Robust Scheduling of Scientific Applications in Heterogeneous Environments with Uncertain Availability In Proceedings of 26th IEEE International Parallel & Distributed Processing Symposium Workshops (IPDPSW) and 21st International Heterogeneity in Computing Workshop (HCW12), 2012 |
ZIH-IR-1235 | T. Ilsche, J. Schuchart, J. Cope, D. Kimpe, T. Jones, A. Knüpfer, K. Iskra, R. Ross, Wolfgang E. Nagel, S. Poole Enabling Event Tracing at Leadership-Class Scale through I/O Forwarding Middleware In HPDC '12, Seiten: 49-60, ISBN: 978-1-4503-0805-2, DOI: 10.1145/2287076.2287085, ACM, 2012 |
ZIH-IR-1234 | E. Volk, J. Buchholz, S. Wesner, D. Koudela, M. Schmidt, N. Fallenbeck, R. Schwarzkopf, B. Freisleben , G. Isenmann, J. Schwitalla, M. Lohrer, E. Focht, A. Jeutter Towards Intelligent Management of Very Large Computing Systems In Competence in High Performance Computing 2010, DOI: 10.1007/978-3-642-24025-6_16, 2012 |
ZIH-IR-1233 | M. Balasubramanian, N. Sukhija, F. Ciorba, I. Banicescu, S. Srivastava 26th IEEE International Parallel & Distributed Processing Symposium Workshops (IPDPSW) 13th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC12), 2012 |
ZIH-IR-1232 | F. Ciorba, T. Hansen, S. Srivastava, I. Banicescu, A. Maciwjewski, H. Siegel 26th IEEE International Parallel & Distributed Processing Symposium Workshops (IPDPSW) 21st International Heterogeneity in Computing Workshop (HCW12), 2012 |
ZIH-IR-1231 | J. Protze, T. Hilbrich,B. R. de Supinki, M. Schulz, M. S. Müller GTI: A Generic Tools Infrastructure for Event-Based Tools in Parallel Systems In IEEE Computer Society, IPDPS '12, Seiten: 1364-1375, ISBN: 978-0-7695-4675-9, 2012 |
ZIH-IR-1230 | T. Hilbrich, J. Protze, M. Schulz, B. R. de Supinski, M. S. Müller MPI Runtime Error Detection with MUST: Advances in Deadlock Detection In IEEE Computer Society Press, SC '12, Seiten: 30:1-30:11, Salt Lake City, Utah, 2012 |
ZIH-IR-1229 | H. Hatzikirou, D. Basanta, M. Simon, K. Schaller, A. Deutsch 'Go or Grow': the Key to the Emergence of Invasion in Tumour Progression? In Mathematical Medicine and Biology, Vol. 29, 1, pages 49 - 65, ISSN: 1477-8599, 1477-8602, DOI: 10.1093/imammb/dqq011, 2012 |
ZIH-IR-1228 | M. Kluge, D. Hackenberg, W. E. Nagel Collecting Distributed Performance Data with Dataheap: Generating and Exploiting a Holistic System View In Journal: Procedia Computer Science, Band: 9, Seiten: 1969-1978, ISSN: 1877-0509, 2012 |
ZIH-IR-1227 | T. William, H. Mix, R. Menzel, B. Mohr, F. Voigtländer Enhanced Performance Analysis of Multi-Core Applications with an Integrated Tool-Chain In Advances in Parallel Computing, Serie: Parallel Computing: From Multicores and GPU's to Petascale, Band 19, Seiten: 701-708, ISBN: 978-1-60750-529-7, 2012 |
ZIH-IR-1226 | M. Hilbrich, R. Müller-Pfefferkorn Identifying limits of scalability in distributed, heterogeneous, layer based monitoring concepts like slate In Journal Computer Science, Band: 13, Nr: 3, Seiten: 23-33, AGH University of Science and Technology Press, 2012 |
ZIH-IR-1225 | R. Henschel, M. Lieber, L. Wu, P. M. Nista, B. J. Haas, R. D. LeDuc Trinity RNA-Seq assembler performance optimization In Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment: Bridging from the eXtreme to the campus and beyond, XSEDE '12, Seiten: 45:1-45:8, ISBN: 978-1-4503-1602-6, 2012 |
ZIH-IR-1224 | F. Foret, J. E. Dawson, R. Villasenor, C. Collinet, A. Deutsch, L. Brusch, M. Zerial, Y. Kalaidzidis, F. Jülicher A general theoretical framework to infer endosomal network dynamics from quantitative image analysis In Journal: Curr. Biol., Band 22, Nr. 15, Seiten: 1381 - 1390, 2012 |
ZIH-IR-1223 | C. G. Ferrara, O. Chara, J. R. Grigera Aggregation of non-polar solutes in water at different pressures and temperatures: The role of hydrophobic interaAction In The Journal of Chemical Physics, Band: 137, Nr. 13, Seiten: 135104-135104-5, ISSN: 00219606, 2012 |
ZIH-IR-1222 | J. Protze, T. Hilbrich, A. Knüpfer, B. R. de Supinki, M. S. Müller Holistic Debugging of MPI Derived Datatypes In IEEE Computer Society, IPDPS '12, Seiten: 354-365, 2012 |
ZIH-IR-1221 | K. Alleva, O. Chara, G. Amodeo Aquaporins: Another piece in the osmotic puzzle In Journal: FEBS Letters, Band 586, Nr: 19, Seiten: 2991-2999, ISSN: 0014-5793, 2012 |
ZIH-IR-1220 | R. Schöne, D. Hackenberg, D. Molka Memory performance at reduced CPU clock speeds: an analysis of current x86_64 processors In Proceedings of the 2012 USENIX conference on Power-Aware Computing and Systems, HotPower'12, Seite 9-9, USENIX Association, 2012 |
ZIH-IR-1219 | W. de Back, J. X. Zhou, L. Brusch On the role of lateral stabilization during early patterning in the pancreas In Journal: Journal of The Royal Society Interface, Band 10, Nr. 79, ISSN: 1742-5689, 1742-5662, 2012 |
ZIH-IR-1218 | S. Herres-Pawlis, G. Birkenheuer, S. Brinkmann, S. Gesing, R. Grunzke, R. Jäkel, O. Kohlbacher, J. Krüger, I. Dos Santos Vieira Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway In Studies in Health Technology and Informatics, 175:142 - 151, IOS Press., 2012 |
ZIH-IR-1217 | S. Gesing, S. Herres-Pawlis, G. Birkenheuer, A. Brinkmann, R. Grunzke, P. Kacsuk, O. Kohlbacher, M. Kozlovszky, J. Krüger, R. Müller-Pfefferkorn, P. Schäfer, T. Steinke The MoSGrid Community – From National to International Scale In EGI Community Forum 2012, Munich, 2012 |
ZIH-IR-1216 | G. Birkenheuer, D. Blunk, S. Breuers, A. Brinkmann, I. Dos Santos Vieira, G. Fels, S. Gesing, R. Grunzke, S. Herres-Pawlis, O. Kohlbacher, J. Krüger, L. Packschies, R. Müller-Pfefferkorn, P. Schäfer, T. Steinke, K. Warzecha, M. Wewior MoSGrid: Efficient Data Management and a Standardized Data Exchange Format for Molecular Simulations in a Grid Environment In Journal of Cheminformatics 2012, 4(Suppl 1):P21, 2012 |
ZIH-IR-1215 | T. Schlemmer, R. Grunzke, S. Gesing, J. Krüger, G. Birkenheuer, R. Müller-Pfefferkorn, O. Kohlbacher Generic User Management for Science Gateways via Virtual Organizations In Organisation: EGI Technical Forum, Prague, Czech Republic, 2012 |
ZIH-IR-1214 | S. Gesing, R. Grunzke, J Krüger, G. Birkenheuer, M. Wewior, P Schäfer, B. Schuller, J. Schuster, S. Herres-Pawlis, S. Breuers, B. Akos, M. Kozlovszky, A. Fabri, L. Packschies, P. Kacsuk, D. Blunk, T.Steinke, A.Brinkmann, G. Fels, R. Müller-Pfefferkorn, R. Jäkel, O. Kohlbacher A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics In Journal of Grid Computing, Band 10, Nr. 4, Seiten: 769-790, 2012 |
ZIH-IR-1213 | R. Grunzke, G. Birkenheuer, D. Blunk, S. Breuers, A. Brinkmann, S.Gesing,S.Herres-Pawlis,O.Kohlbacher, J. Krüger, M.Kruse, R.Müller-Pfefferkorn, P.Schäfer, B.Schuller, T.Steinke, A.Zink A Data Driven Science Gateway for Computational Workflows In Proceedings of UNICORE Summit 2012, IAS Series, Band 15, Seite: 35 - 49, 2012 |
ZIH-IR-1212 | A. Voß-Böhme Multi-Scale Modeling in Morphogenesis: A Critical Analysis of the Cellular Potts Model In PLoS ONE, Vol. 7, Nr. 9, Pages e42852, Public Library of Science, 2012 |
ZIH-IR-1211 | M. Kluge, S. Simms, T. William, R. Hentschel, A. Georgi, C. Meyer, M. S. Müller, C. A. Stewart, W. Wünsch, W. E. Nagel Performance and Quality of Service of Data and Video Movement over a 100 Gbps Testbed In Future Generation Computer Systems, 2012 |
ZIH-IR-1210 | B. Risio, A. Barreth, S. Zuckermann, S. Koliai, W. Jalby, B. Krammer, B. Mohr, T. William, B. Chapman How to Accelerate an Application: a Practical Case Study in Combustion Modelling In Proceedings of the Parallel Computing: From Multicores and GPU's to Petascale, Vol. 19, pages 661-668, IOS Press, 2012 |
ZIH-IR-1209 | M. Hilbrich, R. Müller-Pfefferkorn Achieving Scalability for Job Centric Monitoring in a Distributed Infrastructure In ARCS Workshops, 28. Februar - 2. März 2012, München, Germany, Vol. 200, Pages 481-492, GI, 2012 |
ZIH-IR-1208 | B. M. Chapman, F. Massaioli, M. S. Müller, Marco Rorro (Eds.) OpenMP in a Heterogeneous World In Proceedings of the 8th International Workshop on OpenMP, IWOMP 2012, LNCS 7312, Springer, 2012 |
ZIH-IR-1207 | I. Banicescu, F. Ciorba, S. Srivastava Scalable Computing: Theory and Practice In John Wiley&Sons, Inc., Chapter 22, 2012 |
ZIH-IR-1206 | C. Mente, I. Prade, L. Brusch, G. Breier, A. Deutsch A Lattice-Gas Cellular Automaton Model for in Vitro Sprouting Angiogenesis In Acta Physica Polonica B, Vol. 5, Pages 99 - 115, 2012 |
ZIH-IR-1205 | F. Peruani, J. Starruß, V. Jakovljevic, L. Sogaard-Andersen, A. Deutsch Collective motion and nonequilibrium cluster formation in colonies of gliding bacteria In Physical Review Letters, 2012 |
ZIH-IR-1204 | M. Lieber, V. Grützun, R. Wolke, M. S. Müller, W. E. Nagel, K. Jonasson Highly Scalable Dynamic Load Balancing in the Atmospheric Modeling System COSMO-SPECS+FD4 In Applied Parallel and Scientific Computing, Lecture Notes in Computer Science, Vol. 7133, Pages 131 - 141, Springer, 2012 |
ZIH-IR-1203 | K. Böttger, H. Hatzikirou, A. Chauviere, A. Deutsch Investigation of the Migration/Proliferation Dichotomy and its Impact on Avascular Glioma Invasion In Mathematical Modelling of Natural Phenomena, Vol. 1, No. 7, Pages 105 - 135, 2012 |
ZIH-IR-1202 | D. Hackenberg, G. Juckeland, H. Brunst Performance analysis of multi-level parallelism: inter-node, intra-node and hardware accelerators In Concurrency and Computation: Practice and Experience, Vol. 24, Number 1, Pages 62-72, John Wiley & Sons, 2012 |
ZIH-IR-1201 | D. Molka, R. Schöne, D. Hackenberg, M. S. Müller Memory Performance and SPEC OpenMP Scalability on Quad-Socket x86_64 Systems In Algorithms and Architectures for Parallel Processing, Lecture Notes in Computer Science, Vol. 7016, pages 170-181, Springer, 2011 |