Publications

2020 2021 2022 2023 2024        
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 other publications                Textbooks                   Special issue edits

2024

  • Auer, S., Zamani-Noor, N., Mahfoud, Y., Ludwig-Müller, J. (2024) Exploring the influence of rapeseed cultivar and pathogen isolate on Acremonium alternatum's efficacy in clubroot disease control. Eur. J. Plant Pathol.  article
  • Berková, V., Berka, M., Štěpánková, L., Kováč, J., Auer, S., Menšíková, S., Ďurkovič, J., Kopřiva, S., Ludwig-Müller, J., Brzobohatý, B., Černý, M. (2024) The endophytic fungus A. alternatum modulates its host redox homeostasis through hormone-driven ROS signaling, causing enhanced salt stress tolerance. Physiol. Plant. 176: e14328 article
  • Davosir, D., Šola, I., Ludwig-Müller, J., Šeruga Musić, M. (2024) Flavescence dorée strain-specific impact on phenolic metabolism dynamics in grapevine (Vitis vinifera) through the development of phytoplasma infection. J. Agric. Food Chem. 72: 189-199 article
  • Ludwig-Müller, J. (2024) Production of plant proteins and peptides with pharmacological potential. Adv. Biochem. Eng. Biotechnol. 188: 51-82 book chapter
  • Ntie-Kang, F., Eni, D.B., Telukunta, K.K., Osamor, V.C., Egieyeh, S.A., Duran-Frigola, M., Mishra, P., Shadrack, D.M., Paul, L., Musyoka, T.M., Blin, K., Farid, M.M., Chen, Y., Djogang, L.K., Betow, J.Y., Ibezim, A., Joshi, D., Edwin, A.T., Chama, M.A., Ongagna, J.M., Sinda, P.V.K., Metuge, J.A., Bekono, B.D., Isa, M.A., Medina-Franco, J.L., Weber, T., Dorrestein, P.C., Janezic, D., Bishop, Ö.T., Ludwig-Müller, J. (2024) The workshops on computational applications in secondary metabolite discovery (CAiSMD). Physical Sciences Reviews article
  • Ortega-Villaizán, A.G., King, E., Patel, M.K., Pérez-Alonso, M.-M., Scholz, S.S., Sakakibara, H., Kiba, T., Kojima, M., Takebayashi, Y., Ramos, P., Morales-Quintana, L., Breitenbach, S., Smolko, A., Salopek-Sondi, B., Bauer, N., Ludwig-Müller, J., Krapp, A., Oelmüller, R., Vicente-Carbajosa, J., Pollmann, S. (2024) The endophytic fungus Serendipita indica affects auxin distribution in Arabidopsis thaliana roots through alteration of auxin transport and conjugation to promote plant growth. Plant Cell Environ. 47: 3899-3919 article
  • Smolko, A., Jülke, S., Benade, F., Široká, J., Pěnčík, A., Vuk, T., Bauer, N., Salopek-Sondi, B., Ludwig-Müller, J. (2024) The GH3 protein from the clubroot pathogen Plasmodiophora brassicae causes hormone-related phenotypes in Arabidopsis thaliana. J. Plant Growth Regul. 43: 2715-2738  article
  • Smolko, A., Repar, J., Matković, M., Pavlović, I., Pěnčík, A., Novák, O., Ludwig-Müller, J., Salopek-Sondi, B. (2024) Application of long-chained auxin conjugates influenced auxin metabolism and transcriptome response in Brassica rapa. Int. J. Mol. Sci. 25: 447 article
  • Šola, I. Gmižić, D., Pinterić, M., Tot, A., Ludwig-Müller, J. (2024) Adjustment of broccoli phytochemical profile to low and high growing temperature: implications for the bioactivity of its extracts. Int. J. Mol. Sci. 25: 3677 article

2023

  • Auer, S., Ludwig-Müller, J. (2023) Biocontrol of clubroot disease: how successful are endophytic fungi and bacteria? Eur. J. Plant Pathol. 167: 433–451 article
  • Klueken, A.M., Rößler, S., Mahfoud, Y., Ludwig-Müller, J. (2023) Testing effects of seed treatments against clubroot disease in various oilseed rape hybrids. Pathogens 12: 1339 article
  • Lorenzo, J.C., Acosta, Y., Zevallos-Bravo, B.E., Chmielarz, P., Hajari, E., Höfer, M., Ludwig-Mueller, J. (2023) Exposure of maize seeds to liquid nitrogen modifies the morphology and hormonal response of young plants. CryoLetters 44: 369-377 article
  • Mishra, A.K., Kocábek, T., Nath, V.S., Khan, A., Matoušek; J., Hazzouri, K.M., Sudalaimuthuasari, N., Krofta; K., Ludwig-Müller, J., Amiri, K.M.A. (2023) The multifaceted roles of R2R3 transcription factor HlMYB7 in the regulation of flavonoid and bitter acids pathways, development and biotic stress in hop (Humulus lupulus L.). Plant Physiol. Biochem. 197: 107636  article
  • Scholz, S.S., Barth, E., Clement, G., Marmagne, A., Ludwig-Müller, J., Sakakibara, H., Kiba, T., Vicente-Carbajosa, J., Pollmann, S., Krapp, A., Oelmüller, R. (2023) The root-colonizing endophyte Piriformospora indica supports nitrogen-starved Arabidopsis seedlings with N metabolites. Int. J. Mol. Sci. 24: 15372 article
  • Tokić, M., Leljak Levanić, D., Ludwig-Müller, J., Bauer, N. (2023) Growth and molecular responses of tomato to prolonged and short-term heat exposure. Int. J. Mol. Sci. 24: 4456 article

2022

  • Jahn, L., Storm-Johannsen, L., Seidler, D., Noack, J., Gao, W., Schafhauser, T., Wohlleben, W., van Berkel, W.J.H., Jacques, P., Kar, T., Piechulla, B., Ludwig-Müller, J. (2022) The endophytic fungus Cyanodermella asteris influences growth of the non-natural host plant Arabidopsis thaliana. Mol. Plant-Microbe Interact. 35: 49-63 article
  • Lehr, P.P., Hernández-Montes, E., Ludwig-Müller, J., Keller, M., Zörb, C. (2022) Abscisic acid and proline are not equivalent markers for heat, drought, and combined stress in grapevines. Aust. J. Grape Wine Res. 28: 119-130 article
  • Ludwig-Müller, J. (2022) What can we learn from -omics approaches to understand clubroot disease? Int. J. Mol. Sci.23: 6293 article
  • Ludwig-Müller, J. (2022) Auxins in the right space and time regulate pea fruit development. J. Exp. Bot. 73: 3831–3835 article
  • Mencia, R., Welchen, E., Auer, S., Ludwig-Müller, J. (2022) A novel target (Oxidation Resistant 2) in Arabidopsis thaliana to reduce clubroot disease symptoms via the salicylic acid pathway without growth penalties. Horticulturae 8: 9 article
  • Ortiz-García, P., Pérez-Alonso, M.-M., Ortega-Villaizán, A.G., Sánchez Parra, B., Ludwig-Müller, J., Wilkinson, M.D., Pollmann, S. (2022) The indole-3-acetamide-induced Arabidopsis transcription factor MYB74 decreases plant growth and contributes to the control of osmotic stress responses. Frontiers Plant Sci. 13: 928386 article
  • Parveen, N., Kandhol, N., Sharma, S., Singh, V.P., Chauhan, D.K., Ludwig-Müller, J., Corpas, F.J., Tripathi, D.K. (2022) Auxin crosstalk with reactive oxygen and nitrogen species in plant development and abiotic stress. Plant Cell Physiol. 63: 1814–1825 article
  • Pérez-Alonso, M.-M., Guerrero-Galán, C., Ortega-Villaizán, A.G., Ortiz-García, P., Scholz, S.S., Ramos, P., Sakakibara, H., Kiba, T., Ludwig-Müller, J., Krapp, A., Oelmüller, R., Vicente-Carbajosa, J., Pollmann, S. (2022) The calcium sensor CBL7 is required for Serendipita indica-induced growth stimulation in Arabidopsis thaliana, controlling defense against the endophyte and K+ homeostasis in the symbiosis. Plant Cell Environ. 45: 3367-3382 article
  • Šola, I., Rusak, G., Ludwig-Müller, J. (2022) Response of the moss Physcomitrium patens to satellite-associated cucumber mosaic virus infection on the level of salicylic acid, quercetin and indole-3-acetic acid. Eur. J. Plant Pathol. 163: 441-452 article

2021

  • Ichwan, M., Walker, T.L., Nicola, Z., Ludwig-Müller, J., Böttcher, C., Overall, R.W., Adusumilli, V.S, Bulut, M., Lugo-Hernández, E.A., Ramirez-Rodriguez, G., Kempermann, G. (2021) Apple peel and flesh contain pro-neurogenic compounds. Stem Cell Reports 16: 548–565 article
  • Jahn, L., Hofmann, U., Ludwig-Müller, J. (2021) Indole-3-acetic acid is synthesized by the endophyte Cyanodermella asteris via a Tryptophan-dependent and -independent pathway and mediates the interaction with a non-host plant. Int. J. Mol. Sci. 22: 2651 article
  • Koochak, H., Ludwig-Müller, J. (2021) Physcomitrium patens mutants in auxin conjugating GH3 proteins show salt stress tolerance but auxin homeostasis is not involved in regulation of oxidative stress factors. Plants 10: 1398 article
  • Ludwig-Müller, J., Rattunde, R., Rößler, S., Liedel, K., Benade, F., Rost, A., Becker, J. (2021) Two auxinic herbicides affect Brassica napus plant hormone levels and induce molecular changes in transcription. Biomolecules 11: 1153 article

  • Ntie-Kang, F., Jahn, L., Ludwig-Müller, J. (2021) From genes to secondary metabolites. In: Chemoinformatics of Natural Products, Vol 2 (ed. Ntie-Kang, F.), DeGruyter Berlin, pp. 287-298 book chapter

  • Ntie-Kang, F., Telukunta, K.K., Jahn, L., Ludwig-Müller, J. (2021) Searching natural product databases. In: Chemoinformatics of Natural Products, Vol 2 (ed. Ntie-Kang, F.), DeGruyter Berlin, pp. 271-286 book chapter

  • Ntie-Kang, F., Telukunta, K.K., Fobofou, S.A.T., Osamor, V.C., Egieyeh, S.A., Valli, M., Feunang, Y.D., Sorokina, M., Stork, C., Mathai, N., Zierep, P., Chávez-Hernández, A.L., Duran-Frigola, M., Babiaka, S.B., Fouedjou, R.T., Eni, D.B., Akame, S., Arreyetta-Bawak, A.B., Ebob, O.T., Metuge, J.A., Bekono, B.D., Isa, M.A., Onuku, R., Shadrack, D.M., Musyoka, T.M., van der Hooft, J.J.J., da Silva Bolzani, V., Medina Franco, J.L., Kirchmair, J., Weber, T., Tastan Bishop, Ö., Medema, M.H., Wessjohann, L.A., Ludwig-Müller, J. (2021) Computational Applications in Secondary Metabolite Discovery (CAiSMD): An online workshop. J. Cheminform. 13: 64 article

  • Resemann, H.C., Herrfurth, C., Feussner, K., Hornung, E., Ostendorf, A.K., Gömann, J., Mittag, J., van Gessel, N., de Vries, J., Ludwig-Müller, J., Markham, J., Reski, R., Feussner, I. (2021) Convergence of sphingolipid desaturation across over 500 million years of plant evolution. Nat. Plants 7: 219-232 article
  • Schwelm, A., Ludwig-Müller, J. (2021) Molecular pathotyping of Plasmodiophora brassicae – genomes, marker genes and obstacles. Pathogens 10: 259 article

2020

  • Badstöber, J., Gachon, C., Sandbichler, A.M., Ludwig-Müller, J., Neuhauser, S. (2020) Demystifying Biotrophs: FISHing for mRNAs to decipher plant and algal pathogen-host interaction at the single cell level. Sci. Rep. 10: 14269 article
  • Hurný, A., Cuesta, C., Cavallari, N., Ötvös, K., Duclercq, J., Dokladal, L., Montesinos, J.C., Gallemí, M., Semerádová, H., Rauter, T., Stenzel, I., Persiau, G., Benade, F., Bhalearo, R., Sykorova, E., Gorzsás, A., Sechet, J., Mouille, G., Heilmann, I., de Jaeger, G., Ludwig-Müller, J., Benková, E. (2020) Synergistic on auxin and cytokinin 1 integrates pathways regulating organ growth and pathogen defense. Nature Commun. 11: 2170 article

  • Ludwig-Müller, J. (2020) Synthesis and hydrolysis of auxins and their conjugates with different side-chain lengths: are all products active auxins? Periodicum Biologorum 121-122: 81–96  article

  • Mencia, R., Cecolli, G., Fabro, G., Torti, P., Colombatti, F., Ludwig-Müller, J., Alvarez, M.E., Welchen, E. (2020) Arabidopsis OXR2 increases plant defense acting on the activity of the salicylic acid pathway. Plant Physiol. 184: 1112-1127 article

  • Neumann, M., Prahl, S., Caputi, L., Hill, L., Kular, B., Walter, A., Patallo, E., Milbredt, D., Aires, A., Schöpe, M., O'Connor, S., van Pée, K.-H., Ludwig-Müller, J. (2020) Hairy root transformation of Brassica rapa with bacterial halogenase genes and regeneration to adult plants to modify production of indolic compounds. Phytochemistry 175: 112371 article
  • Pérez-Alonso, M.-M., Guerrero-Galán, C., Scholz, S.S., Kiba, T., Sakakibara, H., Ludwig-Müller, J., Krapp, A., Oelmüller, R., Vicente-Carbajosa, J., Pollmann, S. (2020) Harnessing symbiotic plant–fungus interactions to unleash hidden forces from extreme plant ecosystems. J. Exp. Bot. 71: 3865-3877 article
  • Šola, I., Vujčić Bok, V., Pinterić, M., Auer, S., Ludwig-Müller, J., Rusak, G. (2020) Improving the phytochemical profile and bioactivity of Chinese cabbage sprouts by interspecific transfer of metabolites. Food Res. Int. 137: 109726 article
  • Walter, A., Caputi, L., O'Connor, S., van Pée, K.-H., Ludwig-Müller, J. (2020) Chlorinated auxins - How does Arabidopsis thaliana deal with them? Int. J. Mol. Sci. 21: 2567 article
  • Zerrouk, I.Z., Rahmoune, B., Auer, S., Rößler, S., Lin, T., Baluska, F., Dobrev, P.I., Motyka, V., Ludwig-Müller, J. (2020) Growth and aluminum tolerance of maize roots mediated by auxin- and cytokinin-producing Bacillus toyonensis requires polar auxin transport. Environ. Exp. Bot. 176: 104064 article

2019

  • Aires, A., Neumann, M., Ludwig-Müller, J., Schöpe, M., van Pée, K.H. (2019). Induced production of indol-3-ylmethyl glucosinolates in hairy roots of Chinese cabbage (Brassica rapa subsp. pekinensis): perspectives to enhance the content of bioactive compounds. Acta Hortic. 1242: 49-56 article
  • Aryal, B., Huynh, J., Schneuwly, J., Siffert, A., Liu, J., Alejandro, S., Ludwig-Müller, J., Martinoia, E., Geisler, M. (2019) ABCG36/PEN3/PDR8 is an exporter of the auxin precursor, indole-3-butyric acid, and involved in auxin-controlled development. Front. Plant Sci. 10: 899 article
  • Bulman, S., Richter, F., Marschollek, S., Benade, F., Jülke, S., Ludwig-Müller, J. (2019) Arabidopsis thaliana expressing PbBSMT, a gene encoding a SABATH-type methyltransferase from the plant pathogenic protist Plasmodiophora brassicae, show leaf chlorosis and altered host susceptibility. Plant Biol. 21 (Suppl. 1): 120-130 article
  • Campanella, J., Kurdach, S., Skibitski, R., Smalley, J., Desind, S., Ludwig-Müller, J. (2019) Evidence for the early evolutionary loss of the M20D auxin amidohydrolase family from mosses and horizontal gene transfer from soil bacteria of cryptic hydrolase orthologues to Physcomitrella patens. J. Plant Growth Regul. 38: 1428-1438 article
  • Kruse, L.H., Stegemann, T., Jensen-Kroll, J., Engelhardt, A., Wesseling, A.-W., Lippert, A., Ludwig-Müller, J., Ober, D. (2019) Reduction of pyrrolizidine alkaloid levels in comfrey (Symphytum officinale) hairy roots by RNAi silencing of homospermidine synthase. Planta Med. 85: 1177-1186 article
  • Ludwig-Müller, J. (2019) Auxins and other phytohormones as signals in arbuscular mycorrhiza formation. In: The Model Legume Medicago truncatula (de Bruijn, F.J., ed.), Wiley pp. 766-776 book chapter
  • Ludwig-Müller, J. (2019) Interplay between endophyte and host plant in the synthesis and modification of metabolites. In: Endophyte biotechnology: promise for agriculture and pharmacology (Schouten, A., ed.), CABI, pp. 180-197 book chapter
  • Prado, D.Z., Okino-Delgado, C.H., Silva, R.B.G., Pereira, M.S., Zanutto, M.R., Jahn, L., Ludwig-Müller, J., Silva, M.R., Velini, E., Fleuri, L.F. (2019) Screening of Aspergillus, Bacillus and Trichoderma strains and influence of culture medium on auxin and phytases production. Biocatalysis and Agricultural Biotechnology 19: 101165 article
  • Prado, D.Z., Oliveira, S.L., Okino-Delgado, C.H., Auer, S., Fernandes, C.J.C., Ludwig-Müller, J., Silva, M.R., Carbonari, C.A., Zambuzzi, W.F., Fleuri, L.F. (2019) Aspergillus flavipes as a novel biostimulant for rooting-enhancement of Eucalyptus grandis x E. urophylla. Journal of Cleaner Production 234: 681-689 article
  • Rahmoune, B., Zerrouk, I.Z., Khelifi-Slaoui, M., Morsli, A., Bouzaa, S., Ludwig-Müller, J, Khelifi, L. (2019) Amino acids profiling in Datura stramonium and study of their variations after inoculation with Plant Growth Promoting Rhizobacteria. Biologia 74: 1373-1383 article
  • Schafhauser, T., Jahn, L., Kirchner, N., Kulik, A., Flor, L., Caradec, T., Fewer, D.P., Sivonen, K., van Berkel, W.J.H., Jacques, P., Weber, T., Gross, H., van Pée, K.-H., Wohlleben, W., Ludwig-Müller, J. (2019) Antitumor astins originate from the endophyte Cyanodermella asteris living within the medicinal plant Aster tataricus. Proc. Natl. Acad. Sci. USA 116: 26909-26917 article
  • Vassaux, A., Tarayre, C., Arguëlles-Arias, A., Compère, P., Delvigne, F., Fickers, P., Jahn, L., Lang, A., Leclère, V., Ludwig-Müller, J., Ongena, M., Schafhauser, T., Telek, S., Théatre, A., van Berkel, W.J.H., Vandenbol, M., van Pée, K.-H., Willems, L., Wohlleben, W., Jacques, P. (2019) Astin C production by the endophytic fungus Cyanodermella asteris in planktonic and immobilized culture conditions. Biotechnol. J. 14: 1800624 article
  • Zerrouk, I.Z., Rahmoune, B., Benchabane, M., Khelifi, L., Baluska, F., Ludwig-Müller, J. (2019) An Algerian Sahara PGPR confers root tolerance to salt and aluminum toxicity in maize. Acta Physiol. Plant. 41: 91 article

2018

  • Geilfus, C.-M., Ludwig-Müller, J., Bárdos, G., Zörb, C. (2018) Early response to salt ions in maize (Zea mays L.). J. Plant Physiol. 220: 173-180 article
  • Prerostova, S., Dobrev, P., Konradyova, V., Knirsch, V., Gaudinova, A., Kramna, B., Kazda, J., Ludwig-Müller, J., Vankova, R. (2018) Hormonal responses to Plasmodiophora brassicae infection in Brassica napus cultivars differing in their pathogen resistance. Int. J. Mol. Sci. 19: 4024 article
  • Rehman, H.M., Nawaz, M.A., Shah, Z.H., Ludwig-Müller, J., Chung, G., Ahmad, M.Q., Yang, S.H., Lee, S.I. (2018) Comparative genomic and transcriptomic analyses of Family-1 UDP glycosyltransferase in three Brassica species and Arabidopsis indicates stress-responsive regulation. Sci. Rep. 8: 1875 article
  • Smolko, A., Ludwig-Müller, J., Salopek-Sondi, B. (2018) Auxin amidohydrolases – from structure to function: revisited. Croat. Chem. Acta 91: 233-239 article

2017

  • Jahn, L., Schafhauser, T., Wibberg, D., Rückert, C., Winkler, A., Weber, T., Flor, L., van Pée, K.-H., Kalinowski, J., Ludwig-Müller, J., Wohlleben, W. (2017) The genome sequence of a fungal endophyte from Aster tataricus reveals biosynthesis genes of the main pigment skyrin. J. Biotechnol. 257: 233-239 article

  • Jahn, L., Schafhauser, T., Pan, S., Weber, T., Wohlleben, W., Flor, L., van Pée, K.-H., Caradec, T., Jacques, P., Hujbers, M., van Berkel, W., Fewer, D., Sivonen, K., Ludwig-Müller, J. (2017) A new ostropalean fungus, Cyanodermella asteris sp. nov., from the inflorescence axis of Aster tataricus. Mycotaxon 132: 107-123 article
  • Karačić, Z., Vukelić, B., Ho, G.H., Jozić, I., Sučec, I., Salopek-Sondi, B., Kozlović, M., Brenner, S.E., Ludwig-Müller, J., Abramić, M. (2017) A novel plant enzyme with dual activity: an atypical Nudix hydrolase and a dipeptidyl peptidase III. Biol. Chem. 398: 101-112 article
  • Ludwig-Müller, J., Auer, S., Jülke, S., Marschollek, S. (2017) Manipulation of auxin and cytokinin balance during the Plasmodiophora brassicae-Arabidopsis thaliana interaction. In: Auxin and Cytokinin - Methods and Protocols (Naseem, M., Dandekar, T., eds.), Series: Methods in Molecular Biology, Springer, pp. 41-60 book chapter
  • Malcheska, F., Ahmad, A., Batool, S., Müller, H.M., Ludwig-Müller, J., Kreuzwieser, J., Randewig, D., Hänsch, R., Mendel, R.R., Hell, R., Wirtz, M., Geiger, D., Ache, P., Hedrich, R., Herschbach, C., Rennenberg, H. (2017) Drought enhanced xylem sap sulfate closes stomata by affecting ALMT12 and guard cell ABA synthesis. Plant Physiol. 174: 798-814 article
  • Patallo, E., Walter, A., Milbredt, D., Thomas, M., Neumann, M., Caputi, L., O'Connor, S., Ludwig-Müller, J., van Pée, K.-H. (2017) Strategies to produce chlorinated IAA and IAA intermediates. ChemistrySelect 2: 11148-11153 article

2016

  • Jülke, S., Ludwig-Müller, J. (2016) Response of Arabidopsis thaliana roots with altered lipid transfer protein (LTP) gene expression to the clubroot disease and salt stress. Plants 5: 2 article 
  • Lovelock, D.A., Sola, I., Marschollek, S., Donald, C.E., Rusak, G., van Pee, K.-H., Ludwig-Müller, J., Cahill, D. (2016) Analysis of SA-dependent pathways and the influence of SA on interactions of Arabidopsis thaliana with Plasmodiophora brassicae. Mol. Plant Pathol. 17: 1237-1251 article
  • Ludwig-Müller, J. (2016) Auxin conjugation: Growing out of the shade. Nature Plants 2: 16044 article
  • Ludwig-Müller, J. (2016) Belowground defense strategies for Plasmodiophora brassicae. In: Belowground defence strategies in plants (Vos, C., Kamal, K., eds), Series: Signaling and communication in plants, Springer, pp. book chapter
  • Martin-Rodriguez, J.A., Huertas-Ruz, R., Ocampo, J.A., Turečková, V., Tarkowská, D., Ludwig-Müller, J., Garcia-Garrido, J.M. (2016) Gibberellin-abscisic acid balances during arbuscular mycorrhiza formation in tomato. Front. Plant Sci. 7: 1273 article
  • Schafhauser, T., Kirchner, N., Kulik, A., Huijbers, M.M.E., Flor, L., Caradec, T., Fewer, D.P., Gross, H., Jacques, P., Jahn, L., Jokela, J., Leclere, V., Ludwig-Müller, J., Sivonen, K., van Berkel, W.J.H., Weber, T., Wohlleben, W., van Pee, K.-H. (2016) The cyclochlorotine mycotoxin is produced by the nonribosomal peptide synthetase CctN in Talaromyces islandicus ("Penicillium islandicum"). Environmental Microbiol. 18: 3728-3741  article 
  • Schuller, A., Ludwig-Müller, J. (2016) Histological methods to detect the clubroot pathogen Plasmodiophora brassicae during its complex life cycle. Plant Pathol. 65: 1223-1237 article 
  • Schwelm, A., Dixelius, C., Ludwig-Müller, J. (2016) New kid on the block - the clubroot pathogen genome moves the plasmodiophorids into the genomic era. Eur. J. Plant Pathol. 145: 531-542 article
  • Smolko, A., Supljika, F., Martincic, J., Jajcanin-Jozic, N., Grabar-Branilovic, M., Tomic, S:, Ludwig-Müller, J., Piantanida, I., Salopek-Sondi, B. (2016) The role of conserved Cys residues in Brassica rapa auxin amidohydrolase: the Cys139 is crucial for the enzyme activity and the Cys320 regulates enzyme stability. Phys. Chem. Chem. Phys. 18: 8890-8900 article 
  • Zerrouk, I.Z., Benchabane, M., Khelifi, L., Yokawa, K., Ludwig-Müller, J., Baluska, F. (2016) A Pseudomonas strain isolated from date-palm rhizospheres improves root growth and promotes root formation in maize seedlings exposed to salt stress and aluminum toxicity. J. Plant Physiol. 191: 111-119 article

2015

  • Alnsour, M., Ludwig-Müller, J. (2015) Potential effects of climate change on plant primary and secondary metabolism and its influence on plant ecological interactions. J. Endocytobiosis Cell Res. 26: 90-99 article 
  • Auer, S., Ludwig-Müller, J. (2015) Biological control of clubroot (Plasmodiophora brassicae) by the endophytic fungus Acremonium alternatum. J. Endocytobiosis Cell Res. 26: 43.49 article 
  • Geilfus, C.-M., Niehaus, K., Gödde, V., Hasler, M., Zörb, C., Gorzolka, K., Jezek, M., Senbayram, M., Ludwig-Müller, J., Mühling, K.-H. (2015) Fast responses of metabolites in Vicia faba L. to moderate NaCl stress. Plant Physiol. Biochem. 92: 19-29 article
  • Geilfus, C.-M.,Mithöfer, A., Zörb, C., Ludwig-Müller, J., Mühling, K.-H. (2015)Chloride-inducible transient apoplastic alkalinizations induce stomata closure by controlling abscisic acid distribution between leaf apoplast and guard cells in salt stressed Vicia faba. New Phytol. 208:803-816  article
  • Georgiev, M.I., Radziszewska, A., Neumann, M., Marchev, A., Alipieva, K., Ludwig-Müller, J. (2015) Metabolomic differentiations of Verbascum nigrum L. plants and SAArT transformed hairy roots. Plant Cell Tissue Organ Cult. 123: 349-356 article 
  • Ludwig-Müller, J. (2015) Bacteria and fungi controlling plant growth by manipulating auxin: Balance between development and defense. J. Plant Physiol. 172: 4-12 article
  • Ludwig-Müller, J. (2015) Plants and endophytes - equal partners in secondary metabolite production? Biotechnol. Lett. 37: 1325-1334 article
  • Ludwig-Müller, J., Lüthen, H. (2015) From facts and false routes - How plant hormone research developed. J. Plant Growth Regul. 34: 697-701 article 
  • Ludwig-Müller, J., Jülke, S., Geiß, K., Richter, F., Sola, I., Rusak, G., Mithöfer, A., Keenan, S., Bulman, S. (2015) A novel methyltransferase from the intracellular pathogen Plasmodiophora brassicae methylates salicylic acid. Mol. Plant Pathol. 16: 349-364 article
  • Mittag, J., Gabrielyan, A., Ludwig-Müller, J. (2015) Knockout of GH3 genes in the moss Physcomitrella patens leads to increased IAA levels at elevated temperatures and in darkness. Plant Physiol. Biochem. 97: 339-349 article 
  • Mittag, J., Sola, I., Rusak, G., Ludwig-Müller, J. (2015) Physcomitrella patens auxin conjugate synthetase (GH3) double knockout mutants are more resistant to Pythium infection than wild type. J. Plant Physiol. 183: 75-83 article
  • Salopek-Sondi, B., Pollmann, S., Gruden, K., Oelmüller, R., Ludwig-Müller, J. (2015) Improvement of root architecture under abiotic stress through control of auxin homeostasis in Arabidopsis and Brassica crops. J. Endocytobiosis Cell Res. 26: 100-111 article 
  • Schafhauser, T., Wibberg, D., Rückert, C., Winkler, A., Flor, L., van Pee, K.-H., Fewer, D.P., Sivonen, K., Jahn, L., Ludwig-Müller, J., Caradec, T., Jacques, P., Huijbers, M.M.E., van Berkel, W.J.H., Weber, T., Wohlleben, W., Kalinowski, J. (2015) Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential. J. Biotechnol. 211: 101-102 article 
  • Schwelm, A., Fogelqvist, J., Knaust, A., Jülke, S., Lilja, T., Bonilla-Rosso, G., Karlsson, M., Shevchenko, A., Choi, S.R., Dhandapani, V., Kim, H.G., Park, J.Y., Lim, Y.P., Ludwig-Müller, J., Dixelius, C. (2015) The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases. Sci. Rep. 5: 11153; doi:10.1038/srep11153 article 
  • Yu, P., Lor, P., Ludwig-Müller, J., Hegeman, A.D., Cohen, J.D. (2015) Quantitative evaluation of IAA conjugate pools in Arabidopsis thaliana. Planta 241: 539-548 article 

2014

  • Auer, S., Ludwig-Müller, J. (2014) Effects of the endophyte Acremonium alternatum on oilseed rape (Brassica napus) development and clubroot progression. Albanian J. Agric. Sci. 13: 15-20 article 
  • Campanella, J.J., Zaben, N., Enriquez, D., Smalley, J.V., Ludwig-Müller, J. (2014) An enzymatic analysis of Loblolly pine and Sitka Spruce auxin conjugate hydrolases and evolutionary implications. Acta Hortic. 1042: 79-88 article 
  • Diederichsen, E., Frauen, M., Ludwig-Müller, J. (2014) Clubroot challenges from a German perspective. Can. J. Plant Pathol. 36, S1:85-98 article
  • Geipel, K., Song, X., Socher, M.L., Kümmritz, S., Püschel, J., Bley, T., Ludwig-Müller, J., Steingroewer, J. (2014) Induction of a photomixotrophic plant cell culture of Helianthus annuus and optimization of culture conditions for improved a-tocopherol production. Appl. Microbiol. Biotechnol. 98: 2029-2040 http://rdcu.be/ol7n
  • Hok, S., Allasia, V., Andrio, E., Naessens, E., Ribes, E., Panabieres, F., Attard, A:, Ris, N., Clement, M., Barlet, X., Marco, Y., Grill, E., Eichmann, R., Weis, C., Hückelhoven, R., Ammon, A., Ludwig-Müller, J., Voll, L.M., Keller, H. (2014) The receptor kinase Impaired Oomycete susceptibility 1 attenuates abscisic acid signaling in Arabidopsis thaliana. Plant Physiol. 166: 1506-1518 article
  • Kammerich, J., Beckmann, S., Scharafat, I., Ludwig-Müller, J. (2014) Suppression of the clubroot pathogen Plasmodiophora brassicae by plant growth promoting formulations in roots of two Brassica species. Plant Pathol. 63: 846-857 article
  • Likic, S., Sola, I., Ludwig-Müller, J., Rusak, G. (2014) Involvement of kaempferol in the defence response of virus infected Arabidopsis thaliana. Eur. J. Plant Pathol. 138: 257-271 article
  • Ludwig-Müller, J. (2014) Auxin and the interaction between plants and microorganisms. In: Auxin and its role in plant development (eds. Zazimalova, E., Petrasek, J., Benkova, E.), Springer, pp. 413-434 book chapter
  • Ludwig-Müller, J. (2014) Metabolic engineering of selected secondaty metabolites. In: Production of biomass and bioactive compounds using bioreactor technology (eds. Paek, K.-Y., Murthy, H.N., Zhong, J.-J.), Springer, pp. 509-536 book chapter
  • Ludwig-Müller, J. (2014) Auxin homeostasis, signaling and interaction with other growth hormones during the clubroot disease of Brassicaceae. Plant Signaling Behavior 9, e28593 article
  • Ludwig-Müller, J., Jahn, J., Lippert, A., Püschel, J., Walter, A. (2014) Improvement of hairy root cultures and plants by changing biosynthetic pathways leading to pharmaceutical metabolites: strategies and applications. Biotechnol. Adv. 32: 1168-1179 article
  • Ludwig-Müller, J., Xu, J., Agostini, E., Georgiev, M. (2014) Advances in transformed root cultures for root biofactory and phytoremediation research. In: Root Engineering, Soil Biology 40 (eds. Morte, A., Varma, A.), Springer, pp. 387-405 book chapter
  • Schuller, A., Kehr, J., Ludwig-Müller, J. (2014) Laser Microdissection coupled to transcriptional profiling of Arabidopsis roots inoculated by Plasmodiophora brassicae indicates a role for brassinosteroids in clubroot formation. Plant Cell Physiol. 55: 392-411 article
  • Vankova, R., Petrasek, J., Zazimalova, E., Kaminek, M., Motyka, V., Ludwig-Müller, J. (2014) Auxins and cytokinins in plant development ... and interactions with other phytohormones 2014. J. Plant Growth Regul. 33: 709-714 article

2013

  • Jahn, L., Mucha, S., Bergmann, S., Horn, C., Siemens, J., Staswick, P., Steffens, B., Ludwig-Müller, J. (2013) The clubroot pathogen (Plasmodiophora brassicae) influences auxin signaling to regulate auxin homeostasis. Plants 2: 726-749 article
  • Knaust, A., Ludwig-Müller, J. (2013) The ethylene signaling pathway is needed to restrict root gall growth in Arabidopsis after infection with the obligate biotrophic protist Plasmodiophora brassicae. J. Plant Growth Regul. 32: 9-21 article
  • Päsold, S., Ludwig-Müller, J. (2013) Clubroot (Plasmodiophora brassicae) formation in Arabidopsis is reduced after treatment with prohexadione-calcium, an inhibitor for oxoglutaric acid-dependent dioxygenases. Plant Pathol. 62: 1357-1365 article
  • Salopek-Sondi, B., Samec, D., Mihaljevic, S., Smolko, A., Pavlovic, I., Jankovic, I, Ludwig-Müller, J. (2013) Influence of stress hormones on the auxin homeostasis in Brassica rapa seedlings. Plant Cell Rep. 32: 1031-1042 article
  • Schlicht, M., Ludwig-Müller, J., Volkmann, D., Urbach, C.B., Baluska, F. (2013) Indole-3-butyric acid induces lateral roots via nitric oxide generation by peroxisomes. New Phytol. 200: 473-482 article
  • Zörb, C., Geilfus, C.-M., Mühling, K.H., Ludwig-Müller, J. (2013) The influence of salt stress on ABA and auxin concentrations in two maize cultivars differing in salt resistance. J. Plant Physiol. 170:220-224 article 

2012

  • Georgiev, M., Agostini, E., Ludwig-Müller, J., Xu, J. (2012) Genetically transformed roots: from plant disease to biotechnology. Trends Biotechnol. 30: 528-537 article
  • Junker, A., Mönke, G., Rutten, T., Keilwagen, J., Seifert, M., Thi, T.M.N., Renou, J.-P., Balzergue, S., Viehöver, P., Hähnel, U., Ludwig-Müller, J., Altschmied, L., Conrad, U., Weisshaar, B., Bäumlein, H. (2012) Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana. Plant J. 71: 427-442 article
  • Wu, L.-y., Siemens, J., Li, S.-k., Ludwig-Müller, J., Gong, Y.-j., Zhong, L., He, J.-m. (2012) Estimating Plasmodiophora brassicae gene expression in lines of B. rapa by RT-PCR. Sci. Hort. 133: 1-5 article

2011

  • Agarwal, A., Kaul, V., Faggian, R., Rookes, J.E., Ludwig-Müller, J., Cahill, D.M. (2011) Analysis of global host gene expression during the primary phase of the Arabidopsis thaliana-Plasmodiophora brassicae interaction. Funct. Plant Biol. 38: 462-478 article
  • Campanella, J.J., Sigethy, S., Ludwig-Müller, J. (2011) Truncation of Medicago truncatula auxin conjugate hydrolases does not cause loss in activity but alters substrate specificity. Plant Mol. Biol. Rep. 29: 745-752 article
  • Campanella, J.J., Skibitski, R.S., Schiller, D., Ludwig-Müller, J. (2011) Gymnosperm auxin conjugate hydrolases from Picea sitchensis (Sitka spruce) and their implications on higher plant evolution. Proc. Plant Growth Regul. Soc. of Am. 37: 127-136
  • Georgiev, M., Ludwig-Müller, J., Alipieva, K., Lippert, A. (2011) Sonication-assisted Agrobacterium rhizogenes-mediated transformation of Verbascum xanthophoeniceum Griseb. for bioactive metabolite accumulation. Plant Cell Rep. 30: 859-866 article
  • Georgiev, M., Ludwig-Müller, J., Weber, J., Stancheva, N., Bley, T. (2011) Up-scaling of Devil's claw cell suspension cultures: Bioactive metabolites production and stress-related hormones. Appl. Microbiol. Biotechnol. 89:1683-1691 http://rdcu.be/mLUI
  • Ludwig-Müller, J. (2011) Auxin conjugates: their role for plant development and in the evolution of land plants. J. Exp. Bot. 62: 1757-1773 article
  • Martin-Rodriguez, J.A., Leon-Morcillo, R., Vierheilig, H., Ocampo, J.A., Ludwig-Müller, J., Garcia-Garrido, J.M. (2011) Ethylene dependent/ethylene independent ABA regulation of tomato plants colonized by arbusculular mycorrhiza fungi. New Phytol. 190: 193-205   article
  • Musa, H.H.A., Ahmed, E.E.A., Osman, G.A.M., Ali, H.A., Ludwig-Müller, J. (2011) Microbial load and stability of some phytochemical components of selected Sudanese medicinal plant materials as affected by gamma irradiation. Int. J. Sci. Nat. 2: 204-209 article
  • Siemens, J., Gonzales, M.-C., Wolf, S., Hofmann, C., Greiner, S., Du, Y., Rausch, T., Roitsch, T., Ludwig-Müller, J. (2011) Extracellular invertase is involved in the regulation of the clubroot disease in Arabidopsis thaliana. Mol. Plant Pathol. 12: 247-262 article
  • Stancheva, N., Weber, J., Schulze, J., Alipieva, K., Ludwig-Müller, J., Haas, C., Georgiev, V., Bley, T., Georgiev, M. (2011) Phytochemical and flow cytometry analysis of Devil's claw cell culture. Plant Cell Tiss. Organ Cult. 105: 79-84 article

2010

  • Doan, T.T., Jäschke, D., Ludwig-Müller, J. (2010) An endophytic fungus induces tolerance against the clubroot pathogen Plasmodiophora brassicae in Arabidopsis thaliana and Brassica rapa roots. Acta Hort. 867: 173-180 article 
  • Georgiev, M.I., Ludwig-Müller, J., Bley, T. (2010) Hairy root culture: Copying the nature in new bioprocesses. In: Medicinal Plant Biotechnology (Arora, R., ed.), CAB International, Oxon, United Kingdom, pp. 156-175 book chapter
  • Jäschke, D., Dugassa-Gobena, D., Karlovsky, P., Vidal, S., Ludwig-Müller, J. (2010) Suppression of clubroot development in Arabidopsis thaliana by the endophytic fungus Acremonium alternatum. Plant Pathol. 59: 100-111 article 
  • Jülke, S., Ludwig-Müller, J. (2010) Modulation of lipid transfer proteins alters clubroot development in Arabidopsis thaliana. Acta Hort. 867: 165-172 article 
  • Krome, K., Rosenberg, K., Dickler, C., Kreuzer, K., Ludwig-Müller, J., Ullrich-Eberius, C., Scheu, S., Bonkowski, M. (2010) Soil bacteria and protozoa affect root branching via effects on the hormonal balance in plants. Plant Soil 328: 191-201 article
  • Leljak-Levanic, D., Jezic, M., Cesar, V., Ludwig-Müller, J., Lepedus, H., Mladinic, M., Katic, M., Curcovic-Perica, M. (2010) Biochemical and epigenetic changes in phytoplasma-recovered periwinkle after indole-3-butyric acid treatment. J. Appl. Microbiol. 109: 2069-2078 article 
  • Ludwig-Müller, J. (2010) Hormonal responses in host plants triggered by arbuscular mycorrhizal fungi. Arbuscular Mycorrhizas:Physiology and Function, 2nd edition (Kapulnik, Y:, Koltai, H., eds.), Springer, pp. 169-190 book chapter
  • Ludwig-Müller, J., Denk, K., Cohen, J.D., Quint, M. (2010) An inhibitor of tryptophan-dependent biosynthesis of indole-3-acetic acid alters seedling development in Arabidopsis. J. Plant Growth Regul. 29: 242-248 article
  • Martin Rodriguez, J.A., Morcillo, R.L., Vierheilig, H., Ocampo, J.A., Ludwig-Müller, J., Garcia Garrido, J.M. (2010) Mycorrhization of the notabilis and sitiens tomato mutants in relation to abscisic acid and ethylene contents. J. Plant Physiol. 167: 606-613 article
  • Musa, H.A.A., Ahmed, E.E.A., Osman, G.A.M., Ali, H.A., Ludwig-Müller, J. (2010) Microbial load and phytochemicals stability of camel hay (Cymbopogon schoenanthus L.) leaves as affected by gamma irradiation. Agric. Biol. J. N. Am. 1: 662-670 article 
  • Päsold, S., Siegel, I., Seidel, C., Ludwig-Müller, J. (2010) Flavonoid accumulation in Arabidopsis thaliana root galls caused by the obligate biotrophic pathogen Plasmodiophora brassicae. Mol. Plant Pathol. 11: 545-562 article 
  • Rusak, G., Cerni, S., Stupin Polancec, D., Ludwig-Müller, J. (2010) The responsiveness of the IAA2 promoter to IAA and IBA in Arabidopsis thaliana is differentially affected in roots and shoots by flavonoids. Biol. Plant. 54: 403-414 article
  • Sun, Y., Yang, Y., Yuan, Z., Ludwig-Müller, J., Yu, C., Xu, Y., Li, X., Shao, X., Decker, E.L., Reski, R., Huang, H. (2010) Overexpression of the Arabidopsis gene UPRIGHT ROSETTE reveals a homeostatic control for indole-3-acetic acid (IAA). Plant Physiol. 153: 1311-1320 article

2009

  • Grunwald, U., Guo, W., Fischer, K., Isayenkov, S., Ludwig-Müller, J., Hause, B., Yan, X., Küster, H., Franken, P. (2009) Overlapping expression patterns and differential expression of phosphate transporter genes in arbuscular mycorrhizal, Pi-fertilised and phytohormone-treated Medicago truncatula roots. Planta 229: 1023-1034 article 
  • Keilig, K., Ludwig-Müller, J. (2009) Effect of flavonoids on heavy metal tolerance in Arabidopsis thaliana seedlings. Botanical Studies 50: 311-318 article 
  • Lee, C.-W., Efetova, M., Engelmann, J.C., Kramell, R., Wasternack, C., Ludwig-Müller, J., Hedrich, R., Deeken, R. (2009) Agrobacterium tumefaciens promotes tumor induction by modulating pathogen defense in Arabidopsis thaliana. Plant Cell 21: 2948-2962 article
  • Ludwig-Müller, J. (2009) Glucosinolates and the clubroot disease: defense compounds or auxin precursors? Phytochem. Rev. 8: 135-148 article
  • Ludwig-Müller, J. (2009) Plant defence – what can we learn from clubroots? Australasian Plant Pathol. 38: 318-324 article
  • Ludwig-Müller, J. (2009) Molecular basis for the role of auxins in adventitious rooting. In: Adventitious root formation in forest trees and horticultural plants - From genes to applications (Niemi, K., Scagel, C., eds), Research Signpost, India, pp. 1-29. ISBN: 978-81-308-0342-5 
  • Ludwig-Müller, J., Decker, E.L., Reski, R. (2009) Dead end for auxin conjugates in Physcomitrella? Plant Signaling Behavior 4: 116-118 article
  • Ludwig-Müller, J., Jülke, S., Bierfreund, N.M., Decker, E.L., Reski, R. (2009) Moss (Physcomitrella patens) GH3 proteins act in auxin homeostasis. New Phytol. 181: 323-338 article
  • Ludwig-Müller, J., Prinsen, E., Rolfe, S., Scholes, J. (2009) Metabolism and plant hormone action during the clubroot disease. J. Plant Growth Regul. 28: 229-244 article
  • Rusak, G., Piantanida, I., Bretschneider, S., Ludwig-Müller, J. (2009) Complex formation of quercetin with lanthanum enhances binding to plant viral satellite double stranded RNA. J. Inorg. Biochem. 103: 1597-1601 article
  • Savić, B., Tomić, S., Magnus, V., Gruden, K., Barle, K., Grenković, R., Ludwig-Müller, J., Salopek-Sondi, B. (2009) Auxin amidohydrolases from Brassica rapa cleave the alanine conjugate of indolepropionic acid as a preferable substrate: a biochemical and modeling approach. Plant Cell Physiol. 50: 1587-1599 article
  • Siemens, J., Graf, H., Bulman, S., In, O., Ludwig-Müller, J. (2009) Monitoring expression of selected Plasmodiophora brassicae genes during clubroot development in Arabidopsis thaliana. Plant Pathol. 58: 130-136 article

2008

  • Campanella, J.J., Smith, S.M., Leibu, D., Wexler, S., Ludwig-Müller, J. (2008) The auxin conjugate hydrolase family of Medicago truncatula and their expression during the interaction with two symbionts. J. Plant Growth Regul. 27: 26-38 article 
  • Ehlert, B., Schöttler, M.A., Tischendorf, G., Ludwig-Müller, J., Bock, R. (2008) The paramutated  SULFUREA locus of tomato is involved in auxin biosynthesis. J. Exp. Bot. 59: 3635-3674 article 
  • Haas, C., Georgiev, M., Weber, J., Ludwig-Müller, J., Deponte, S., Bley, T. (2008) Flow cytometry and phytochemical analysis of cell suspension culture of sunflower in 5-L bioreactor. Z. Naturforschung 63c: 699-705 article 
  • Ludwig-Müller, J., Georgiev, M., Bley, T. (2008) Metabolite and hormonal status of hairy root cultures of Devil’s claw (Harpagophytum procumbens) in flasks and in a bubble column bioreactor. Process Biochem. 43: 15-23 article 
  • Ludwig-Müller, J., Schuller, A. (2008) What can we learn from clubroots: Alterations in host roots and hormone homeostasis caused by Plasmodiophora brassicae. Eur. J. Plant Pathol. 121: 291-302 article 
  • Siemens, J., Glawischnig, E., Ludwig-Müller, J. (2008) Indole glucosinolates and camalexin do not influence the development of the clubroot disease in Arabidopsis thaliana. J. Phytopathol. 156: 332-337 article 
  • Vadassery, J., Ritter, C., Venus, Y., Camehl, I., Varma, A., Shahollari, B., Novák, O., Strnad, M., Ludwig-Müller, J., Oelmüller, R. (2008) The role of auxins and cytokinins in the mutualistic interaction between Arabidopsis and Piriformospora indica. Mol. Plant-Microbe Interact. 21: 1371-1383 article 
  • Walz, A., Seidel, C., Rusak, G., Park, S., Cohen, J.D., Ludwig-Müller, J. (2008) Heterologous expression of IAP1, a seed protein from bean modified by indole-3-acetic acid, in Arabidopsis thaliana and Medicago truncatula. Planta 227: 1047-106 article 

2007

  • Jentschel, K., Thiel, D., Rehn, F., Ludwig-Müller, J. (2007) Arbuscular mycorrhiza enhances auxin levels and alters auxin biosynthesis in Tropaeolum majus during early stages of colonization. Physiol. Plant. 129: 320-333 article
  • Ludwig-Müller, J. (2007) Indole-3-butyric acid synthesis in ecotypes and mutants of Arabidopsis thaliana under different growth conditions. J. Plant Physiol. 164: 47-59 article 
  • Ludwig-Müller, J., Güther, M. (2007) Auxins as signals in arbuscular mycorrhiza formation. Plant Signaling & Behavior 2: 194-196 article
  • Meixner, C., Vegvari, G., Ludwig-Müller, J., Gagnon, H., Steinkellner, S., Gresshoff, P., Staehelin, C., Vierheilig, H. (2007) Two defined alleles of the LRR receptor kinase GmNARK in supernodulating soybean govern differing autoregulation of mycorrhization. Physiol. Plant. 130: 261-270 article
  • Schaarschmidt, S., Kopka, J., Ludwig-Müller, J., Hause, B. (2007) Regulation of arbuscular mycorrhiza by apoplastic invertases: Increased invertase activity in the leaf apoplast affects the symbiotic interaction. Plant J. 51: 390-405 article
  • Zerche, S., Verma, S.S., Ewald, A., Ludwig-Müller, J. (2007) Quality of Primula vulgaris seeds as related to maturation level, mineral composition, abscisic acid content, storage duration and eluate conductivity. Seed Sci. Technol. 35: 111-128 article

2006

  • Kaminek, M., Ludwig-Müller, J., Vankova, R., Zazimalova, E. (2006) Meeting report: Auxins and cytokinins in plant development 2005. J. Plant Growth Regul. 25: 89-97 article
  • Ludwig-Müller, J., Schuller, A., Olajide, A.F., Bakllamaja, V., Campanella, J.J. (2006) Auxin conjugate hydrolysis during plant-microbe interaction and evolution. Proceedings PGRSA 33: 34-40 
  • Schuller, A., Ludwig-Müller, J. (2006) A family of auxin conjugate hydrolases from Brassica rapa: Characterization and expression during clubroot disease. New Phytol. 171: 145-158 article
  • Seidel, C., Walz, A., Park, S., Cohen, J.D., Ludwig-Müller, J. (2006) Indole-3-acetic acid protein conjugates: Novel players in auxin homeostasis. Plant Biol. 8: 340-345 article
  • Siemens, J., Keller, I., Sarx, J., Kunz, S., Schuller, A., Nagel, W., Schmülling, T., Parniske, M., Ludwig-Müller, J. (2006) Transcriptome analysis of Arabidopsis thaliana clubroots. Acta Hort. 706: 301-306 article
  • Siemens, J., Keller, I., Sarx, J., Kunz, S., Schuller, A., Nagel, W., Schmülling, T., Parniske, M., Ludwig-Müller, J. (2006) Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development. Mol. Plant-Microbe Interact. 19: 480-494 article

2005

  • Bennett, R.N., Wenke, T., Freudenberg, B., Mellon, F.A., Ludwig-Müller, J. (2005) The tu8 mutation of Arabidopsis thaliana encoding a heterochromatin protein 1 causes defects in the induction of secondary metabolite biosynthesis. Plant Biol. 7: 348-357 article
  • Fitze, D., Wiepning, A., Kaldorf, M., Ludwig-Müller, J. (2005) Auxins in the development of an arbuscular mycorrhizal symbiosis in maize. J. Plant Physiol. 162: 1210-1219 article 
  • Gutzeit, H.O., Tokalov, S.V., Ludwig-Müller, J., Rusak, G. (2005) Monitoring flavonoid metabolism in human cells by exploiting fluorescence elicited upon quercetin/protein interactions. Croat. Chem. Acta 78: 337-342 article
  • Ludwig-Müller, J., Tokalov, S.V., Franz, A., Gutzeit, H.O. (2005) Quercetin metabolism in vital and apoptotic human leukaemia cells. Biol. Chem. 386: 279-283 article
  • Ludwig-Müller, J., Vertocnik, A., Town, C.D. (2005) Analysis of indole-3-butyric acid induced adventitious root formation on Arabidopsis stem segments. J. Exp. Bot. 56: 2095-2105 article
  • Ludwig-Müller, J., Walz, A., Slovin, J.P., Epstein, E., Cohen, J.D., Dong, W., Town, C.D. (2005) Overexpression of the iaglu gene from maize in Arabidopsis thaliana alters plant growth and sensitivity to IAA but not IBA and 2,4-D. J. Plant Growth Regul. 24: 127-141 article
  • Meixner, C., Ludwig-Müller, J., Miersch, O., Gresshoff, P., Staehelin, C., Vierheilig, H. (2005) Lack of mycorrhizal autoregulation and phytohormonal changes in the supernodulating soybean mutant nts1007. Planta 222: 709-715 article 
  • Rusak, G., Gutzeit, H., Ludwig-Müller, J. (2005) Structurally related flavonoids with antioxidative properties differentially affect cell cycle progression and apoptosis of human acute leukemia cells. Nutr. Res. 25: 143-155 article

2004

  • Campanella, J.J., Olajide, A., Magnus, V., Ludwig-Müller, J. (2004) A novel auxin conjugate hydrolase from Triticum aestivum with substrate specificity for longer side-chain auxin amide conjugates. Plant Physiol. 135: 2230-2240 article
  • Doan, T.T., Ludwig-Müller, J., Nguyen, X.H. (2004) Some results of research on the main stages of infection and development of Plasmodiophora brassicae Wor., causing club root disease and the possibility to control the disease with soil pH amendment (in Vietnamese). Journal of Plant Protection 5: 20-25 
  • Grubb, C.D., Zipp, B. J., Ludwig-Müller, J., Masuno, M.N., Molinski, T.F., Abel, S. (2004) Arabidopsis glucosyltransferase UGT74B1 functions in glucosinolate biosynthesis and auxin homeostasis. Plant J. 40: 893-908 article
  • Ludwig-Müller, J. (2004) From auxin homeostasis to understanding plant pathogen and plant symbiont interaction: Editor’s Research Interests. J. Plant Growth Regul. 23: 1-8 article
  • Nitzsche, A., Tokalov, S.V., Gutzeit, H.O., Ludwig-Müller, J. (2004) Chemical and biological characterization of cinnamic acid derivatives from cell cultures of lavender (Lavandula officinalis) induced by stress and jasmonic acid. J. Agric. Food Chem. 52: 2915-2923 article

2003

  • Campanella, J.J., Ludwig-Müller, J., Bakllamaja, V., Sharma, V., Cartier, A. (2003) ILR1 and sILR1 IAA amidohydrolase homologs differ in expression pattern and substrate specificity. Plant Growth Regul. 41: 215-223 article
  • Kaldorf, M., Fitze, D., Herrera, R., Ludwig-Müller, J. (2003) Physiologische und molekularbiologische Ansätze zur Analyse der Funktion von  Indol-3-buttersäure in der Entwicklung arbuskulärer Mykorrhizen. In: Prozessregulation in der Rhizosphäre. 13. Borkheider Seminar zur Ökophysiologie des Wurzelraumes (eds. Merbach, W., Hütsch, B.W., Wittenmayer, L., Augustin, J.), pp. 75-80. B.G. Teubner, Stuttgart, Leipzig, Wiesbaden.
  • Ludwig-Müller, J. (2003) Peroxidase isoenzymes as markers for the rooting ability of easy-to-root and difficult-to-root Grevillea species. In Vitro-Plant 39: 377-383 article

2002

  • Brodmann, D., Schuller, A., Ludwig-Müller, J., Aeschbacher, R. A., Wiemken, A., Boller, T., Wingler, A. (2002) Induction of trehalase in Arabidopsis plants infected with the trehalose-producing pathogen Plasmodiophora brassicae. Mol. Plant Microbe Interact. 15: 693-700 article
  • Ludwig-Müller, J., Bennett, R., Garcia-Garrido, J.M., Piché, Y., Vierheilig, H. (2002) Reduced arbuscular mycorrhizal root colonization in Tropaeolum majus and Carica papaya after jasmonic acid application cannot be attributed to increased glucosinolate levels. J. Plant Physiol. 159: 517-523 article 
  • Ludwig-Müller, J., Cohen, J.D. (2002) Identification and quantification
    of three active auxins in different tissues of Tropaeolum majus. Physiol. Plant. 115: 320-329 article
  • Mühlenberg, I., Schuller, A., Siemens, J., Kobelt, P., Ludwig-Müller, J. (2002) Plasmodiophora brassicae, the causal agent of clubroot disease, may penetrate plant cell walls via cellulase. Plant Protect. Sci. 38: 69-72 article
  • Rusak, G., Gutzeit, H., Ludwig-Müller, J. (2002) Effects of structurally related flavonoids on hsp gene expression in human promyeloid leukaemia cells. Food Technol. Biotechnol. 40: 267-273 article
  • Schuller, A., Ludwig-Müller, J. (2002) Isolation of differentially expressed genes involved in clubroot disease. Plant Protect. Sci. 38: 483-486 article
  • Siemens, J., Nagel, M., Ludwig-Müller, J., Sacristán, M.D. (2002) The interaction of Plasmodiophora brassicae and Arabidopsis thaliana: Parameters for disease quantification and screening of mutant lines. J. Phytopathol. 150: 592-605 article 
  • van Pée, K.-H., Ludwig-Müller, J. (2002) Halogenated indole derivatives. Current Topics in Phytochemistry 5: 1-21
  • Walz, A., Park, S., Slovin, J.P., Ludwig-Müller, J., Momonoki, Y., Cohen, J.D. (2002) A gene encoding a protein modified by the phytohormone indoleacetic acid. Proc. Natl. Acad. Sci. USA 99:1718-1723 article

2001

  • Galovic, V., Navalusic, J., Baraldi, R. , Ludwig-Müller, J. (2001) Quantification of indole-3-acetic acid in hops cultivars by GC-MS analysis. Proceedings of the Scientific Commission of the International Hop Growers' Convention, Canterbury, Kent, England, pp 96-10

2000

  • Grsic-Rausch, S., Kobelt, P., Siemens, J., Bischoff, M., Ludwig-Müller, J. (2000) Expression and localization of nitrilase during symptom development of the clubroot disease in Arabidopsis thaliana. Plant Physiol. 122: 369-378 article
  • Kaldorf, M., Ludwig-Müller, J. (2000) AM fungi might affect the root morphology of maize by increasing indole-3-butyric acid biosynthesis. Physiol. Plant. 109: 58-67 article
  • Ludwig-Müller, J. (2000) Kohlhernie – neue Ansätze zur Bekämpfung der gefürchteten Kohlerkrankung. Biologie in unserer Zeit 30: 14-23 article
  • Ludwig-Müller, J. (2000) Hormonal balance in plants during colonization by mycorrhizal fungi. In: Arbuscular Mycorrhizas: molecular biology and physiology (D.D. Douds, Y. Kapulnik, eds.), Kluwer Academic Publishers, Dordrecht, The Netherlands, pp 263-285, ISBN 0-7923-6444-9 book chapter
  • Ludwig-Müller, J. (2000) Indole-3-butyric acid in plant growth and development. Plant Growth Regul. 32: 219-230 article
  • Ludwig-Müller, J., Schubert, B., Rademacher, W., Hilgenberg, W. (2000) Indole-3-butyric acid synthesis in maize is enhanced by cyclohexanedione herbicides. Physiol. Plant. 110: 544-550 article
  • Ludwig-Müller, J., Krishna, P., Forreiter, C. (2000) A glucosinolate mutant of Arabidopsis thaliana is thermosensitive and defective in cytosolic Hsp90 expression after heat stress. Plant Physiol. 123: 949-958 article
  • Neuhaus, K., Grsic-Rausch, S., Sauerteig, S., Ludwig-Müller, J. (2000) Arabidopsis plants transformed with nitrilase 1 or 2 in antisense direction are delayed in clubroot development. J. Plant Physiol. 156: 756-761 article 
  • Puzio, P.S., Newe, M., Grymaszewska, G., Ludwig-Müller, J., Grundler, F.M.W. (2000) Plasmodiophora brassicae-induced expression of pyk20, an Arabidopsis thaliana gene with glutamine-rich domain. Physiol. Mol. Plant Pathol. 56: 79-84 article
  • Vierheilig, H., Bennett, R., Kiddle, G., Kaldorf, M., Ludwig-Müller, J. (2000) Differences in glucosinolate patterns and arbuscular mycorrhizal status of glucosinolate-containing plant species. New Phytol. 146: 343-352 article

1999

  • Ludwig-Müller, J. (1999) Plasmodiophora brassicae, the causal agent of clubroot disease: a review on molecular and biochemical events in pathogenesis. Zeitschr. Pflanzenkr. Pflanzenschutz 106: 109-127 article
  • Ludwig-Müller, J., Ihmig, S., Bennett, R., Kiddle, G., Ruppel, M., Hilgenberg, W. (1999) The host range of Plasmodiophora brassicae and its relationship to endogenous glucosinolate content. New Phytol. 141: 443-458 article
  • Grsic, S., Kirchheim, B., Pieper, K., Fritsch, M., Hilgenberg, W., Ludwig-Müller, J. (1999) Induction of auxin biosynthetic enzymes by jasmonic acid and in clubroot diseased Chinese cabbage plants. Physiol. Plant. 105: 521-531 article
  • Ludwig-Müller, J., Pieper, K., Ruppel, M., Cohen, J.D., Epstein, E., Kiddle, G., Bennett, R. (1999) Indole glucosinolate and auxin biosynthesis in Arabidopsis thaliana L. glucosinolate mutants and the development of the clubroot disease. Planta 208: 409-419 article 
  • Ludwig-Müller, J. (1999) The biosynthesis of auxins. Curr. Topics Plant Biol. 1: 77-88
  • Wallsgrove, R., Bennett, R., Kiddle, G., Bartlet, E., Ludwig-Mueller, J. (1999) Glucosinolate biosynthesis and pest/disease interactions. In: New Horizons for an old crop (Wratten, N., Salisbury, P.A., eds.), Proceedings of the 10th International Rapeseed Congress, Canberra, Australia,  (pp1-5) http://www.regional.org.au/au/gcirc/3/393.htm#P1_56

1998

  • Holtorf, S., Ludwig-Müller, J., Apel, K., Bohlmann, H. (1998) High level expression of a viscotoxin in Arabidopsis thaliana gives enhanced resistance against Plasmodiophora brassicae. Plant Mol. Biol. 36: 673-680 article
  • Grsic, S., Kobelt, P., Siemens, J., Ludwig-Müller, J. (1998) Cell type-specific induction of an auxin synthesising enzyme during infection of Arabidopsis thaliana with the obligate biotrophic fungus Plasmodiophora brassicae. Proc. 2nd Balkan Symposium on Field Crops, Novi Sad, Yugoslavia, Vol. 2, Ecology & Physiology. Cultural Practices (Stamencovic, S., ed.), pp 181-183, Mala Knjiga Press, Novi Sad
  • Grsic, S., Sauerteig, S., Neuhaus, K., Albrecht, M., Rossiter, J., Ludwig-Müller, J. (1998) Physiological analysis of transgenic Arabidopsis thaliana plants expressing one nitrilase isoform in sense or antisense direction. J. Plant Physiol. 153: 446-456 article 

1997

  • Ludwig-Müller, J., Schubert, B., Pieper, K., Ihmig, S., Hilgenberg, W. (1997)  Glucosinolate content in susceptible and tolerant Chinese cabbage varieties during the  development of the clubroot disease. Phytochemistry 44: 407-414 article
  • Ludwig-Müller, J., Kaldorf, M., Sutter, E.G., Epstein, E. (1997) Indole-3-butyric acid  (IBA) is enhanced in young maize (Zea mays L.) roots colonized with the arbuscular mycorrhizal fungus Glomus intraradices. Plant Sci. 125: 153-162 article
  • Ludwig-Müller, J., Pieper, K., Schubert, B., Kaldorf, M., Epstein, E. (1997) Regulation of indole-3-butyric acid biosynthesis in maize. Proc. Plant Growth Regul. Soc. Am. 1997: 63-67

1996

  • Ludwig-Müller, J., Epstein, E., Hilgenberg, W. (1996) Auxin-conjugate hydrolysis in Chinese cabbage: Characterization of an amidohydrolase and its role during the clubroot disease. Physiol. Plant. 97: 627-634 article
  • Campanella, J.J., Ludwig-Müller, J., Town, C.D. (1996) Isolation and characterization of mutants of Arabidopsis thaliana with increased resistance to growth inhibition by IAA-amino acid conjugates. Plant Physiol. 112: 735-746 article

1995

  • Bennett, R., Ludwig-Müller, J., Kiddle, G., Hilgenberg, W., Wallsgrove, R. (1995)  Developmental regulation of aldoxime formation in seedlings and mature plants of Chinese cabbage (Brassica campestris ssp. pekinensis) and oilseed rape (Brassica napus): Glucosinolate and IAA biosynthetic enzymes. Planta 196: 239-244 article
  • Bischoff, M., Löw, R., Grsic, S., Rausch, T., Hilgenberg, W., Ludwig-Müller, J. (1995) Infection with the obligate biotroph Plasmodiophora brassicae, the causal agent of the clubroot disease, does not affect expression of NIT1/2-related nitrilases in roots of Chinese cabbage. J. Plant Physiol. 147: 341-345 article
  • Ludwig-Müller, J., Hilgenberg, W., Epstein, E. (1995) The in vitro biosynthesis of indole-3-butyric acid in maize. Phytochemistry 40: 61-68 article
  • Ludwig-Müller, J., Hilgenberg, W. (1995) Characterization and partial purification of indole-3-butyric acid synthetase from maize (Zea mays). Physiol. Plant. 94: 651-660 article
  • Ludwig-Müller, J., Raisig, A., Hilgenberg, W. (1995) Uptake and transport of indole-3-butyric acid in Arabidopsis thaliana: Comparison with other natural and synthetic auxins. J. Plant Physiol., 147: 351-354. article 
  • Ludwig-Müller, J., Kasperczyk, N., Schubert, B., Hilgenberg, W. (1995) Identification of salicylic acid in Chinese cabbage and its possible role during root infection with Plasmodiophora brassicae. Current topics in Phytochemistry 14: 39-45

1994

  • Ludwig-Müller, J., Epstein, E. (1994) Indole-3-butyric acid in Arabidopsis thaliana. III. In vivo biosynthesis. Plant Growth Regul. 14: 7-14 article
  • Ludwig-Müller, J., Thermann, P., Pieper, K., Hilgenberg, W. (1994) Peroxidase and chitinase isoenzyme activities during root infection of Chinese cabbage with Plasmodiophora brassicae Woron. Physiol. Plant. 90: 661-670 article

1993

  • Ludwig-Müller, J., Epstein, E. (1993) Analysis of indole-3-butyric acid in Arabidopsis thaliana. Acta Hortic. 329: 109-111 article
  • Ludwig-Müller, J., Sass, S., Sutter, E.G., Wodner, M., Epstein, E. (1993) Indole-3-butyric acid in Arabidopsis thaliana. I. Identification and quantification. Plant Growth Regul. 13: 179-187 article
  • Ludwig-Müller, J., Epstein, E. (1993) Indole-3-butyric acid in Arabidopsis thaliana. II. In vivo metabolism. Plant Growth Regul. 13: 189-195 article
  • Epstein, E., Ludwig-Müller, J. (1993) Indole-3-butyric acid in plants: occurrence, synthesis, metabolism and transport. Physiol. Plant. 88: 382-389 article
  • Ludwig-Müller, J., Bendel, U., Thermann, P., Ruppel, M., Epstein, E.,  Hilgenberg, W.  (1993) Concentrations of indole-3-acetic acid in plants of tolerant and susceptible varieties of Chinese cabbage infected with Plasmodiophora brassicae Woron. New Phytol. 125: 763-769 article

1992

  • Ludwig-Müller, J., Epstein, E. (1992) Indole-3-acetic acid is converted to indole-3-butyric acid by seedlings of Zea mays L. In: Progress in Plant Growth Regulation (Karssen, C.M., van Loon, L.C., Vreugdenhill, D eds.), pp. 188-193, Kluwer Academic Publishers, Dordrecht, The Netherlands, ISBN 0-7923-1617-7 book chapter
  • Ludwig-Müller, J., Hilgenberg, W. (1992) Tryptophan oxidizing enzyme and basic peroxidase isoenzymes in Arabidopsis thaliana (L.) Heynh.: Are they identical? Plant Cell Physiol. 33: 1115-1125 article

1991

  • Ludwig-Müller, J., Epstein, E. (1991) Occurrence and in vivo biosynthesis of indole-3-butyric acid in corn (Zea mays L.). Plant Physiol. 97: 765-770 article
  • Ludwig-Müller, J., Schramm, P., Hilgenberg, W. (1991) Indole-3-acetaldehyde  dehydrogenase activity in Phycomyces blakesleeanus Bgff. Plant Physiol. (Life Sci.  Adv.) 10: 45-49

1990

  • Ludwig-Müller, J., Rausch, T., Lang, S., Hilgenberg, W. (1990) Plasma membrane  bound high pI peroxidase isoenzymes convert tryptophan to indole-3-acetaldoxime. Phytochemistry 29: 1397-1400 article
  • Ludwig-Müller, J., Hilgenberg, W. (1990) Conversion of indole-3-acetaldoxime to indole-3-acetonitrile by plasma membranes from Chinese cabbage. Physiol. Plant. 79: 311-318 article
  • Ludwig-Müller, J., Schramm, P., Hilgenberg, W. (1990) Indole-3-acetaldehyde  reductase in Phycomyces blakesleeanus Bgff. Characterization of the enzyme. Physiol. Plant. 80: 472-478 article
  • Ludwig-Müller, J., Hilgenberg, W. (1990) Identification of indole-3-acetaldehyde and indole-3-acetaldehyde reductase in Chinese cabbage. Physiol. Plant. 80: 541-548 article

1989

  • Ludwig-Müller, J., Hilgenberg, W. (1989) N-Malonyltryptophan metabolism by seedlings of Chinese cabbage. Phytochemistry 28: 2571-2575 article
  • Ludwig-Müller, J., Hilgenberg, W. (1989) Purification of NADPH-specific indole-3-acetaldehyde reductase from Cucumis sativus by two-dimensional native polyacrylamide gel electrophoresis. Physiol. Plant. 77: 613-619 article

1988

  • Ludwig-Müller, J., Hilgenberg, W. (1988) A plasma membrane-bound enzyme oxidizes L-tryptophan to indole-3-acetaldoxime. Physiol. Plant. 74: 240-250 article

Other publications

  • Steingroewer, J., Ludwig-Müller, J., Bley, T. (2013) Pflanzliche Zell- und Gewebekulturen - Neue Produktionssysteme für die Biotechnologie. BioSpektrum 06.13: 683-686
  • Geipel, K., Lenk, F., Bley, T., Steingroewer, J., Püschel, J., Ludwig-Müller, J. (2012) Die Sonnenblume im Bioreaktor: Herstellung von alpha-Tocopherol mithilfe pflanzlicher Zell- und Gewebekulturen. Lebensmitteltechnik 9: 55-56
  • Bandurski, R.S., Baraldi, R., Cohen, J.D., Ilic, N., Ludwig-Müller, J., Michalczuk, L:, Salopek-Sondi, B. (2009) In Memory of Dr. Volker Magnus, Plant Biologist. J. Plant Growth Regul. 28: 305-308 article 
  • Ludwig-Müller, J., Schulz, B., Neinhuis, C. (2005) Wie wichtig ist der Mond für Pflanzen? Wissenschaftliche Zeitschrift TU Dresden 54/1-2: 65-69
  • Hempel, W., Ludwig-Müller, J. (2001) Wissenschaftliche Zusammenarbeit der Botanischen Institute Dresden und Talca (Chile). Wissenschaftliche Zeitschrift TU Dresden 50/4: 74-78
  • Ludwig-Müller, J. (2000) Pflanzliche Biotechnologie für die Gesundheit. Dresdner Transferbrief 3: 26

Textbooks

  • Ludwig-Müller, J., Gutzeit, H.O. (2014) Biologie von Naturstoffen: Synthese, Funktion und medizinischer Nutzen von bioaktiven Substanzen aus Pflanzen, UTB
  • Gutzeit, H.O., Ludwig-Müller, J. (2014) Plant Natural Products - Synthesis, Biological Functions and Pharmaceutical Applications, Wiley

Special issues edits

History of Plant Hormones (Journal of Plant Growth Regulation)

The role of auxin in plant-microbe interactions (Frontiers in Plant Science)

About this page

Jutta Ludwig-Müller
Last modified: Sep 13, 2024