Publications 2024 - 2021

Publications and talks 2024

SCI-Publications in journals with peer review process

J. Sun, B. Yang, N. Koukourakis, J. Guck, J. Czarske, “AI-driven projection tomography with multicore fibre-optic cell rotation”, Nature Communications 15:147 (2024)

C. Bilsing, E. Nützenadel, S. Burgmann, J. Czarske, L. Büttner, “Adaptive-optical 3D microscopy for microfluidic multiphase flows”, Light: Advanced Manufacturing 5:37 (2024)

J. Lich, T. Glosemeyer, J. Czarske, R. Kuschmierz, “Single-shot 3D incoherent imaging with diffuser endoscopy”, Light: Advanced Manufacturing 5:15 (2024)

J. Sun, B. Zhao, D. Wang, Z. Wang, J. Zhang, N. Koukourakis, J. Czarske, X. Li, “Calibration-free quantitative phase imaging in multi-core fiber endoscopes using end-to-end deep learning”, Optics Letters (49), 342-345 (2024)

F. Bürkle, R. Maestri, G. Lecrivain, U. Hampel, L. Büttner, J. Czarske, “Investigation of the gas and film flow of Taylor bubble in a tube with a short constriction employing 3D particle tracking”, Experimental and Computational Multiphase Flow 7(2), 166-167 (2024)

Z. Gao, X. Ge, L. Zhu, S. Ma, A. Li, L. Büttner, J. Czarske, P. Yang, “Flow field estimation with distortion correction based on multiple input deep convolutional neural networks and Hartmann-Shack wavefront sensing”, Photonics 11(5), 452 (2024)

T. Wang, J. Dremel, S. Richter, W. Polanski, O. Uckermann, I. Eyüpoglu, J. Czarske, R. Kuschmierz, “Resolution-enhanced multi-core fiber imaging learned on a digital twin for cancer diagnosis”, Neurophotonics 11(S1) (2024)

R. Maestri, S. Radhakrishnakumar, F. Bürkle, W. Ding, L. Büttner, J. Czarske, U. Hampel, G. Lecrivain, “Equilibrium Taylor bubble in a narrow vertical tube with constriction”, Physics of Fluids 36, 032108 (2024)

J. Sun, R. Kuschmierz, O. Katz, N. Koukourakis, J. Czarske, “Lensless fiber endomicroscopy in biomedicine”, PhotoniX-Perspective, 5:18 (2024)

K. Zolnacz, R. Stephan, J. Dremel, K. Hausmann, M. Liessmann, M. Steinke, J. Czarske, R. Kuschmierz, “Multicore fiber with thermally expanded cores for increased collection efficiency in endoscopic imaging”, Light: Advanced Manufacturing, 5:49 (2024)

S. Tasmany, D. Kaiser, J. Woisetschläger, J. Gürtler, R. Kuschmierz, J. Czarske, “Heterodyne background-oriented schlieren for the measurement of thermoacoustic oscillations in flames”, Experiments in Fluids (65), 151 (2024)

S Rothe, F. Barbosa, F. Ferreira, J. Czarske, “Unlocking mode programming with multi-plane light conversion using computer-generated hologram optimisation", JPhys Photonics (7) (2024)

Invited talks at conferences (with proceedings) and seminars (without proceedings)

J. Czarske, Q. Zhang, D. Pohle, J. Sun, Y. Miao, S. Rothe, “Fiber-optical Sensing and Communication exploiting physics-informed deep learning and quantum technology”, UCL, OPTICA, Optica British and Irish Conference on Optics and Photonics, IET London: Savoy Place London, UK, 18^th – 20^th December 2024 (invited by F. Ferraro)

J. Czarske, Q. Zhang, D. Krause, R. Kuschmierz, T. Glosemeyer, J. Dremel, J. Sun, K. Koukourakis, “Multimode Fiber Communication and Multicore Fiber Endoscopy Exploiting Physics-informed Deep Neural Networks”, Tam Wing Fan Innovation Wing Two, Run Run Shaw Building, The University of Hong Kong Hong Kong, China, 5^th December 2024

J. Czarske, Q. Zhang, D. Krause, R. Kuschmierz, T. Glosemeyer, J. Dremel, J. Sun, “Biomedical Imaging, Sensing and Communication with Multicore and Multimode Fibers Exploiting Physics-Informed Deep Neural Networks”, Shenzhen Technology University Shenzhen, China, 4^th December 2024

J. Czarske, F. Schmieder, R. Wendland, L. Buettner, R. Kuschmierz, T. Glosemeyer, J. Dremel, J. Sun, N. Koukourakis, “Lensless multicore fiber endoscopy and holographic optogenetics with organoids towards advancing biomedicine”, Monash University Melbourne, Australia, 2^nd December 2024

J. Czarske, K. Żołnacz, R. Kuschmierz, J. Dremel, M. Steinke, R. Stephan, “Lensless 3D imaging using multicore fiber endoscopy and Two-Photon Polymerization (2PP)-printed holograms towards advancing biomedicine”, Workshop on 3D printing of Photonics Components-Session 3: 3D printing of polymer, RMI University Melbourne, Australia, 1^st December 2024 (invited by J. Li and H. Ebendorff-Heidepriem)

J. Czarske, D. Krause, R. Kuschmierz, T. Glosemeyer, J. Dremel, J. Sun, K. Koukourakis, “Lensless 3D imaging using multicore fibers exploiting physics-informed deep neural networks towards biomedicine”, Adelaide University, Australia, 29^th November 2024 (invited by J. Li)

J. Czarske, Q. Zhang, D. Pohle, R. Kuschmierz, T. Glosemeyer, J. Dremel, J. Sun, “Optical Fiber Technology for Biomedical Imaging and Communication Exploiting Physics-informed Deep Neural Networks”, National University of Singapore, 27^th November 2024

J. Czarske, Q. Zhang, D. Pohle, S. Rothe, N. Koukourakis, R. Kuschmierz, J. Dremel, L. Buettner, “Physics-informed deep neural networks for multicore and multimode fibers towards advancing biomedicine and quantum communication”, Shanghai Institute of Optics and Fine Mechanics SIOM Shanghai, China, 25^th November 2024 (invited by Situ Guohai)

J. Czarske, Q. Zhan, J. Sun, S. Rothe, “Physics-informed deep neural networks for mode
decomposition in quantum and classical communication”, International Conference on Neuromorphic Photonics (ICNP24), University of Shanghai for Science and Technology Shanghai, China, 24^th November 2024

J. Czarske, K. Żołnacz, R. Kuschmierz, J. Dremel, “Lensless 3D imaging using multicore fibers with holograms by additive and subtractive manufacturing”, LAM Advanced Manufacturing Technology Conference, Ji Hua Laboratory Foshan City, China, 21^st November 2024 (invited from W. Osten)

J. Czarske, F. Schmieder, R. Wendland, L. Buettner, “Human induced pluripotent stem cell-derived neurons and cardiomyocytes investigated by holographic closed-loop optogenetics”, International Conference on Optics Within Life Sciences OWLS-17, Victor Menezes Convention Centre, IIT Bombay, India, 19^th November 2024 (invited by Prof. S. Maiti, Professor and Chair, Department of Chemical Sciences, TIFR Mumbai)

J. Czarske, T. Glosemeyer, R. Kuschmierz, Q. Zhang, L. Buettner, “Physics-informed deep neural networks for multicore and multimode fiber sensors towards biomedicine and communication”, Seminar of Student Branch Chapter of IEEE Photonics Society, City University London, United Kingdom, 1^st October 2024 (invited by Prof. A. Rahman, Professor of Photonics at City University)

J. Czarske, D. Pohle, T. Glosemeyer, R. Kuschmierz, Q. Zhang, L. Buettner, “Multimode fiber communication exploiting physics-informed deep neural networks towards physical layer security and entangled photon teleportation”, Seminar of Student Branch Chapter of OPTICA and IEEE Photonics Society, University College London London, United Kingdom, 31^st September 2024 (invited by Dr. F. Marques Ferreira and Prof. P. Bayvel)

J. Czarske, T. Glosemeyer, R. Kuschmierz, C. Bilsing, L. Buettner, “Lensless multicore fiber endoscopy and double-helix point spread function-based imaging towards advancing biomedicine”, Seminar University of Colorado Boulder Colorado, USA, 26^th September 2024 (invited by Prof. R. Piestun)

T. Glosemeyer, J. Lich, R. Kuschmierz, J. Czarske, “3D Diffuser Encoded Imaging and Physics-Informed Neural Network Reconstruction”, Frontiers in Optics + Laser Science 2024 (FiO LS), Colorado Convention Center Denver, USA, 25^th September 2024 (invited by FiO1)

J. Czarske, T. Glosemeyer, R. Kuschmierz, L. Buettner, “Single-shot imaging exploiting physics-informed deep learning and second-generation quantum technology”, Seminar Tucson, USA, 26^th August 2024 (invited by Prof. F. Willomitzer)

J. Czarske, T. Glosemeyer, R. Kuschmierz, N. Koukourakis, “Lensless single-shot 3D imaging towards biomedicine”, City University of New York, USA, 29^th August 2024 (invited by Optica Student Chapter and Prof. R. Alfano)

J. Czarske, T. Glosemeyer, R. Kuschmierz, J. Dremel, T. Wang, N. Koukourakis, “Physics-informed deep neural networks for multicore and multimode fiber information transmission towards biomedicine and communication”, Yale University New Haven, USA, 30^th August 2024 (invited by Prof H. Cao)

J. Czarske, T. Glosemeyer, J. Dremel, T. Wang, R. Kuschmierz, L. Buettner, “Paradigm shifts with physics-informed deep neural networks for lensless single-shot imaging towards biomedicine”, UCLA Samueli School of Engineering Los Angeles, USA, 16^th August 2024 (invited by Aydogan Ozcan)

T. Glosemeyer, J. Lich, J. Czarske, R. Kuschmierz, “Diffuser endoscopy for single-shot fluorescence imaging using physics-informed deep learning”, Optical Trapping and Optical Micromanipulation XXI, SPIE Nanoscience + Engineering, San Diego, USA, 19^th August 2024

J. Sun, Z. Chen, Y. Tang, B. Yang, Z. Wang, G. Huang, B. Zhao, X. Li, J. Czarske, “AI-driven multicore fiber-optic cell rotation”, Optical Trapping and Optical Micromanipulation XXI, SPIE Nanoscience + Engineering, San Diego, USA, 19^th August 2024

J. Czarske, J. Zhang, N. Koukourakis, “Optical Measurement and Sensor Systems for
Advancements in Manufacturing”, virtual conference Taiwan-Germany, TSMC, 4^th July 2024

J. Czarske, N. Koukourakis, J. Sun, “Optical diffraction tomography of rotated cancer cells using lensless fiber endoscopy and deep neural networks”, SPIE BiOS and SPIE Photonics West San Francisco, USA, 28^th January 2024 (invited by P. YongKeun Park, KAIST)

J. Czarske, T. Glosemeyer, R. Kuschmierz, L. Buettner, Q. Zhang, “Lensless fiber imaging using deep neural networks and quantum technology”, SPIE Photonics Europe, Strasbourg, France, 10^th April 2024, (invited by I. Georgakoudi, M. P. Georges, N. Verrier)

L. Büttner, C. Bilsing, F. Bürkle, J. Czarske, „Adaptive Optics for Studying Fluid Mechanics at Interfaces”, Center of Interface Studies (CIS) Kick-off Event, Helmholtz-Zentrum Dresden-Rossendorf HZDR Dresden, Germany, 3^rd May 2024

J. Czarske, T. Glosemeyer, R. Kuschmierz, Q. Zhang, “Single-shot 3D Imaging Exploiting Holography and Physics-informed Neural Network Reconstruction”, Keynote at Optica Digital Holography and Three-Dimensional Imaging, Mec Paestum Hotel Capaccio, Italy, 5^th June 2024 (invited by P. Ferraro)

J. Czarske, T. Glosemeyer, J. Sun, Q. Zhang, R. Kuschmierz, N. Koukourakis, “Fiber communication and biophotonics, exploiting deep learning and structured light”, Changchun, China, 17^th June 2024 (invited by Student Chapter of IEEE Photonics Society, OPTICA and SPIE Student Chapters)

Q. Zhang, J. Czarske, “AI-based Mode Decomposition for classical and quantum communication through multimode fibers as MIMO channels”, Changchun, China, 17^th June 2024 (invited by Student Chapter of IEEE Photonics Society, OPTICA and SPIE Student Chapters)

J. Czarske, T. Glosemeyer, R. Kuschmierz, L. Buettner, “Lensless 3D imaging using deep neural networks and quantum technology using entangled photons towards biomedicine”, Keynote at Light Conference, Track 2 Biophotonics, Changchun, China, 19^th June, 2024

J. Czarske, T. Glosemeyer, Q. Zhang, R. Kuschmierz, L. Buettner, “Computational imaging using holography and physics-informed deep learning for biomedicine and quantum technology of second generation”, Seminar at Institute of Optics and Fine Mechanics (SIOM), Shanghai, China, 21^st June 2024 (invited by G. Situ)

J. Czarske, T. Glosemeyer, Q. Zhang, R. Kuschmierz, L. Buettner, “Computational imaging using holography, physics-informed deep learning and optical signal processing for biomedicine and fiber communication”, Jiao Tong University Shanghai, China, 24^th June 2024 (invited by Chapter of IEEE Photonics Society)

J. Czarske, T. Glosemeyer, Q. Zhang, R. Kuschmierz, J. Sun, L. Buettner, “Computational imaging using physics-informed deep learning for biomedicine and quantum technology”, Zhejiang University - College of Optical Science and Engineering (COSE), Hangzhou, China, 25^th June 2024

J. Czarske, T. Glosemeyer, J. Dremel, T. Wang, R. Kuschmierz, J. Sun, “Computational imaging using digital holography and deep learning for biomedicine”, Talk at Suzhou Institute of Biomedical Engineering and Technology (SIBET), 26^th June 2024

J. Czarske, T. Glosemeyer, Q. Zhang, R. Kuschmierz, J. Sun, L. Buettner, “Computational imaging using physics-informed deep learning for biomedicine and fiber communication”, Seminar at University of Shanghai for Science & Technology Business School, Shanghai, China, 26^th June 2024 (invited by Prof. Min Gu)

D. Weik, Z. Dou, H. Emmerich, H. Bischoff, L. Büttner, J. Czarske, „Multimodale Ultraschallbildgebung: Wellenfrontkorrektur für neue Zugänge der Diagnostik“, UltrasounDD – Ultrasonic Interdisciplinary Symposium Dresden, EKFZ AI & Electronics Dresden, Germany, 11^th September 2024

J. Czarske, T. Glosemeyer, Q. Zhang, R. Kuschmierz, L. Buettner, “Minimally invasive laser-based endoscopy with optical fibers for biomedicine and quantum technology”, SAW- Sächsischen Akademie der Wissenschaften Leipzig, Germany, 9^th February 2024 (invited plenary presentation)

K. Schmidt, N. Koukourakis, U. Wallrabe, J. Czarske, „Smart Scanning Microscopy with Adaptive Lenses and Prisms”, Optica Imaging Congress, Toulouse, France, July 2024, (invited talk)

R. Kuschmierz, J. Dremel, K. Zolnacz, T. Glosemeyer, J. Czarske, „Measuring and compensating the optical transfer functions of flexible imaging waveguides for lensless endoscopy“, EOSAM European optical society annual meeting, Naples, Italy, September 2024, (invited talk)

R. Kuschmierz, J. Dremel, T. Glosemeyer, K. Zolnacz, R. Stephan, M. Steinke, J.

Czarske, “Building a mechanical flexible and ultrathin lens for minimally invasive endoscopy”, 23^rd Slovak-Czech-Polish Optical Conference, Štrbské pleso, Slovakia, September 2024, (invited talk)

International Conferences (reviewed)

S. Forschner, P. Cornwall, M. Ballester, M. M. Balaji, J. Czarske, and F. Willomitzer.

Towards synthetic wavelength imaging through multi-mode fibers. Proc. SPIE Vol.

13258, 1325801-212, Tucson, USA, 10^th – 12^th July 2024.

Q. Zhan, J. Sun, S. Rothe, J. Czarske, “Physics-informed neural networks for classical and quantum communication with multimode fibers”, Frontiers in Optics (FiO) -Annual Meeting of OPTICA, Denver, USA, 23^rd September 2024

K. Schmidt, N. Koukourakis, J. Czarske, “Towards label-free imaging and analysis of 3D tissues using deep neural networks”, Part of Nanoscience + Engineering, Conference 13112, Optical Trapping and Optical Micromanipulation XXI, SPIE, San Diego, USA, 20^th August 2024

Q. Zhang, Y. Sui, S. Rothe, J. Czarske, “Learning to decompose multimode fibers using a physics-informed neural network”, Part of Nanoscience + Engineering, Conference 13112, Optical Trapping and Optical Micromanipulation XXI, SPIE, San Diego, USA, 22^nd August 2024

J. Wu, J. Czarske, L. Cao, “Diffraction model-driven network for light field generation through a coherent fiber bundle”, Part of Nanoscience + Engineering, Conference 13112, Optical Trapping and Optical Micromanipulation XXI, SPIE, San Diego, USA, 19^th August 2024

T. Glosemeyer, J. Lich, R. Kuschmierz, J. Czarske, „3D fluorescence imaging with diffuser endoscopy and physics-informed deep learning”, SPIE Photonics West, San Francisco, USA, 27^th January 2024 

J. Czarske, R. Kuschmierz, J. Dremel, M. Kroll, E. Scharf, “Lensless endoscopy via wavefront shaping for fluorescence imaging”, SPIE Photonics West, San Francisco, USA, 29^th January 2024   

J. Dremel, M. Kroll, T. Thiele, E. Scharf, R. Stephan, M. Steinke, J. Czarske, R. Kuschmierz, „Fabrication of holograms on optical fibers via femto-second laser techniques”, SPIE Photonics West, San Francisco, USA, 1^st February 2024

J. Dremel, T. Wang, S. Richter, O. Uckermann, W. Polanski, I. Eyüpoglu, J. Czarske, R. Kuschmierz, „ In vivo brain tumor classification using fiber endoscopy”, SPIE Photonics West, San Francisco, USA, 27^th January 2024 

F. Schmieder, L. Büttner, A.T. Pierce, W. Derks, O. Bergmann, J.W. Czarske, “Single-cell investigation of excitation wavefront propagation in in vitro human induced cardiomyocytes using a digital holographic stimulation system”, Part of SPIE BiOS, SPIE Photonics West, San Francisco, USA, 27^th January 2024

F. Schmieder, A.T. Pierce, L. Büttner, W. Derks, O. Bergmann, J.W. Czarske, “Optogenetic stimulation and fast label-free wide field video microscopy for the investigation of excitation wavefronts in in vitro cardiac tissue”, Poster at SPIE BiOS, SPIE Photonics West, San Francisco, USA, 28^th January 2024

D. Krause, J. Böhm, L. Liebig, N. Koukourakis, J. Czarske, “Investigation on impulsive stimulated Brillouin microscopy for high-speed elastography in hydrogel”, SPIE BiOS, SPIE Photonics West, San Francisco, USA, 27^th January 2024

D. Krause, J. Sun, L. Liebig, N. Koukourakis, J. Czarske, “Full-angle projection tomography with AI-enhanced fibre optics rotation: from cells to organoids”, Optical Trapping and Optical Micromanipulation XXI, SPIE Optics + Photonics, San Diego, USA, 20^th August 2024

L. Büttner, Z. Gao, P. Yang, C. Bilsing, J. Czarske, „Multiple-input deep neural network aberration correction for measurements in microfluidics through fluctuating phase boundaries”, SPIE Optics + Photonics, paper 13149-34, San Diego, USA, 18^th – 22^nd August 2024 

J. Boehm, D. Krause, N. Koukourakis, J. Czarske, “Correction quality criterion for DOPC guide-stars”, SPIE Photonics Europe, Strasbourg, Europe, 10^th April 2024

B. Yang, J. Sun, N. Koukourakis, J. Czarske, “Learning-based optical diffraction tomography for label-free 3D cell imaging”, SPIE Photonics Europe, Strasbourg, France, 10^th April 2024

D. Pohle, P. Carniello, N. Hanik, J. Czarske, “Characterization and modelling of multimode fibers using holographic transmission matrix measurements”, SPIE Photonics Europe, Strasbourg, France, 10^th April 2024

K. Schmidt, N. Guo, N. Koukourakis, M. von Witzleben, M. Gelinsky, J. Czarske, “Virtual staining on unlabeled tissue samples”, SPIE Photonics Europe, Strasbourg, France, 11^th April 2024

Y. Sui, Q. Zhang, S. Rothe, J. Czarske, “Reference-free phase retrieval of multimode fibers enhanced by physics-driven neural network”, SPIE Photonics Europe, Strasbourg, France,  8^th April 2024

J. Zhang, J. Sun, N. Koukourakis, J. Czarske, “Lensless microendoscope for quantitative phase imaging with flexible working distance”, SPIE Photonics Europe, Strasbourg, France, 8^th April 2024

F. Schmieder, M.A. Sikandar, R. Habibey, L. Büttner, O. Bergmann, V. Busskamp, J. Czarske, “Optogenetics with Human Stem-Cell-Derived Cardiomyocytes and Neuronal Networks”, Optogen 2024, Prague, Czech Republic, 16^th April 2024

R. Kuschmierz, E. Scharf, R. Stephan, L. Linhsen, K. Zolnacz, T. Glosemeyer, M. Steinke, J. Czarske, „High resolution lensless fiber endoscopy for optogenetics and neurophotonics“, Optogen 2024, Prague, Czech Republic, 16^th April 2024

S. Richter, Jakob Dremel, T. Wang, I. Eyüpoglu, J. Czarske, K. Kirsche, R. Kuschmierz, W. Polanski, O. Uckermann, „Autofluorescence based recognition of brain tumors with a convolutional neural network“, Deutsche Gesellschaft für Neurochirurgie, Göttingen, Germany, 9^th June 2024 

J. Hoppe, R. Nauber, D. Castellanos Robles, J. Czarske, M. Medina-Sánchez, “Influence of hyperparameters on the performance of deep learning-based microrobotic localization under phantom tissue”, MARSS, Delft, Netherlands, 2024

H. Emmerich, V. Tholan, C. Zhang, S. Heitkam, K. Eckert, Z. Dou, J. Czarske, D. Weik, “Selective bubble detection in a multi-phase flow using non-linear acoustics”, Ultrasonic Industry Association Annual Symposium UIA52, Dublin, Ireland, 2024

H. Emmerich, L. Knüpfer, D. Weik, J. Czarske, P. Trtik, K. Eckert, S. Heitkam, „Ultrasonic measurement to determine temporally and spatially resolved liquid fraction of foam”, 15th European Foam Conference (EUFOAM), Dresden, Germany, 2024

Q. Zhang, Y. Sui, S. Rothe, J. Czarske, “Learning to decompose highly multimode fiber system over 1000 modes using physics-informed mode decomposition neural network”, Light Conference, Track 7: Optical Imaging and Metrology, Changchun, China, 20^th June 2024

T. Wang, J. Dremel, S. Richter, W. Polanski, O. Uckermann, I. Eyüpoglu, J. Czarske, R. Kuschmierz, “Image restoration via learning on a digital twin for multi-core fiber endoscopy”, Optica Imaging Congress (BEST PAPER Award of OPTICA), Toulouse, France, July 2024

C. Bilsing, L. Büttner, A. Metzmacher, U. Janoske, J. Czarske, S. Burgmann, “Analysis of the Flow Structure inside an Oscillating Sessile Drops in a Shear Flow Using Double-Helix 3D Particle Tracking Velocimetry and Adaptive Optics”, 21^st International Symposium on Application of Laser and Imaging Techniques to Fluid Mechanics, , Lisbon, Portugal, 10^th July 2024

S. Tasmany, D. Kaiser, J. Woisetschläger, J. Gürtler, R. Kuschmierz, J. Czarske, “Background-Oriented Schlieren for the Detection of Thermoacoustic Oscillations in Flames”, 21^st International Symposium on Application of Laser and Imaging Techniques to Fluid Mechanics, Lisbon, Portugal, 10^th July 2024

J. Gürtler, S. Tasmany, J. Woisetschläger, R. Kuschmierz, J. Czarske, “Tomographic reconstruction of combustion flow fields from density measurements based on physics-informed neural networks”, 21^st International Symposium on Application of Laser and Imaging Techniques to Fluid Mechanics, , Lisbon, Portugal, 10^th July 2024

K. Zolnacz, R. Stephan, J. Dremel, K. Hausmann, M. Liessmann, M. Steinke, J. Czarske, R. Kuschmierz, „Lensless multicore fiber endoscope with expanded cores for improved light collection,” Frontiers in Optics (FiO) -Annual Meeting of OPTICA, Denver, USA, 26^th September 2024

National conferences (reviewed) and Talks (no review, seminar/workshop)

D. Weik, D. Räbiger, T. Vogt, S. Eckert, L. Büttner, J. Czarske, „Ultrasound Localization Microscopy for Super-Resolved Flow Fields in Liquid Metal Experiments”, 4th International Workshop on Measuring Techniques for Liquid Metal Flows (MTLM2024), Dresden, 2024

H. Emmerich, Z. Dou, D. Weik, J. Czarske, V. Tholan, S. Heitkam, K. Eckert, “Determination of the bubble size in bubbly liquids using non-linear acoustic interaction”, Jahrestreffen Dechema Fachgruppen 2024, Bremen, Germany, 2024

L. Büttner, J. Czarske, M. Gräfe, „Quantum Imaging with Undetected Light –
A New IR Imaging Modality”, Workshop "Optische in-Prozess Sensorik, Sensornetze und Sensorfusion, Quantensensorik", Bremer Institut für Angewandte Strahltechnik (BIAS), Bremen, Germany, 20th November 2024

Book Chapters, Books, Editorials

R. Nauber, L. Büttner, J. Czarske, “Special Issue on Computational Ultrasound Imaging and Applications - Applied Sciences”, 2024 - mdpi.com

Patents and Patent Applications

P. Warkusz, R. Kuschmierz, J. Lich, J. Czarske, „Bore inspection device“, DE Patent, submitted and transferred to JENOPTIK Industrial Metrology Germany GmbH

R. Kuschmierz, J. Czarske, „Method and arrangement for adaptive illumination of an object with light“, European Patent, granted

R. Kuschmierz, M. Kroll, E. Scharf, J. Czarske, „Method for compensating the dispersion in image waveguides“, European Patent, filed

R. Kuschmierz, J. Dremel, E. Scharf, J. Czarske, „Method and device for compensating phase interference of multiple wavelengths of image waveguides”, DE & US Patent, filed

T. Glosemeyer, R. Kuschmierz, J. Czarske, „Method for the transmission of high-resolution image information through image waveguides”, DE Patent, filed

SCI-Publications in journals with peer review process

J.Sun, J. Czarske, “Compressive holographic sensing simplifies quantitative phase imaging”, Light: Science & Applications, 2023

S. Rothe, KL Besser, D Krause, R Kuschmierz, N Koukourakis, …, JW Czarske, “Securing Data in Multimode Fibers by Exploiting Mode-Dependent Light Propagation Effects”, Research, https://doi.org/10.34133/research.0065 (2023)

D. Pohle, F A Barbosa, F F Ferreira, JW Czarske, S Rothe, “Intelligent self calibration tool for adaptive few-mode fiber multiplexers using multiplane light conversion”, JEOS, https://doi.org/10.1051/jeos/2023020 (2023)

H. Emmerich, L. Knüpfer, S. Heitkam, E. Starke, P. Trtik, L. Schaller, D. Weik, JW Czarske, "Ultrasound imaging of liquid fraction in foam," IEEE Transactions on Instrumentation and
Measurement 72 (2023), 6500211. 72 (2023), 6500211 https://doi.org/10.1109/TIM.2022.3228582 (2023)

J. Sun, B. Yang, N. Koukourakis, J. Guck, and JW. Czarske, "AI-driven projection tomography with multicore fibre-optic cell rotation", Nature Communications, 2023

Zhang Q, Charania S, Rothe S, Koukourakis N, Neumann N, Plettemeier D,  J. Czarske , “Multimode Optical Interconnects on Silicon Interposer Enable Confidential Hardware-to-Hardware Communication”. Sensors. 2023; 23(13):6076. https://doi.org/10.3390/s23136076

K. Schmidt, N. Guo, W. Wang, J. Czarske, and N. Koukourakis, "Chromatic aberration correction employing reinforcement learning," Opt. Express 31, 16133-16147 (2023)
Invited talks at conferences (with proceedings)

W. Wang, K. Schmidt, M. Wapler, U. Wallrabe, J. Czarske, and N. Koukourakis, "Fully refractive telecentric f-theta microscope based on adaptive elements for 3D raster scanning of biological tissues", Optics Express, 2023

Z. Dou, B. Fang, L. Tropf, H. Hoster, H. Schmidt, J. Czarske and D. Weik, "A Water Monitoring System for Proton Exchange Membrane Fuel cells Based on Ultrasonic Lamb Waves: An Ex-situ Proof of Concept", IEEE Transactions on Instrumentation and Measurement 72 (2023), 9601112

J. Sun, Bin Yang, N. Koukourakis, J. Guck, and J.Czarske, "AI-driven projection tomography with multicore fibre-optic cell rotation", #NCOMMS-23-26221B, Nature Communications, 2023

R. Maestri, S. Radhakrishnakumar, F. Bürkle, W. Ding, L. Büttner, J. Czarske, U. Hampel and G. Lecrivain, "Equilibrium Taylor bubble in a narrow vertical tube with constriction", Physics of Fluids, 2023.

Invited talks at conferences (with proceedings)

S. Rothe, Karl-Ludwig Besser, D. Krause, D. Pohle, Robert Kuschmierz, N. Koukourakis, E. Jorswieck, J. Czarske, Achieving Information Security in Spatially Multiplexed Communication Systems by Harnessing Disorder of Multimode Fibres. In 2023 23rd International Conference on Transparent Optical Networks (ICTON), invited by Norbert Hanik (TU Munich), 2023

JW Czarske, N Koukourakis, S Rothe, F Wagner, MO Karl, “Investigation of neurodegeneration in the human organoid retina with transmission matrix measurements”, 30 January 2023 (Conference Presentation), Adaptive Optics and Wavefront Control for Biological Systems IX, PC123880E, Part of SPIE BiOS, San Francisco, USA (invited talk), 2023

J. Sun, J Czarske, “Smart multi-core fiber endoscope for light field control and detection”, 5th International Forum of Advanced Photonics for Young Scientists, Zhejiang University, 2023 (invited talk)

J Czarske, E Scharf, R Kuschmierz, “3D printed holograms onside of the multicore fiber facet for lensless 3D imaging with keyhole access”, ITO Colloquium, Stuttgart, 24 March 2023 (invited talk)

J Czarske, R Kuschmierz, “Novel lensless multicore fiber endoscopy using femtosecond laser- based 3D printed holograms and deep learning for biomedicine”, invited by Robert Alfano (New York City University), Fort Lauderdale, Florida, US, LOPS Conference, June 2023 (invited talk)

J Czarske, N Koukourakis, J. Sun, “Multicore fiber endoscopy for 3D rotation of cancer cells – QPI Tomography of Cells”, SPIE Metrology Conference, June 2023, Munich (invited talk)

J. Czarske, T Glosemeyer, J Lich, R Kuschmierz, „Computational Lensless Multicore Fiber Endoscopy using Diffuser and Physics-Informed Deep Learning (Keynote)”, Optics Frontier: The 14th International Conference on Information Optics and Photonics, Xi´an, China, 7-10 August 2023

J. Sun, N Koukourakis, JW Czarske “Computational multicore fiber-optic cell rotation tomography with isotropic 3D resolution (Invited)”, Optics Frontier:The 14th International Conference on Information Optics and Photonics, Xi´an, China, 7-10 August 2023

T. Wang, J. Dremel, J. Wu, O. Uckermann, R. Galli, I. Eyüpoglu, J. Czarske, R. Kuschmierz,  “Learning-based lensless fiber bundle imaging with real-time resolution enhancement for biomedicine”, SPIE Optics + Photonics Conference 2023, San Diego, USA, August 2023 (invited talk)

J. Czarske (TU Dresden, Germany), R Kuschmierz, “Novel lensless endoscopic imaging using multicore fibers and physics-informed deep learning for biomedicine”, Keynote, Light Conference Week, Light Conference, Academic League, Prize Ceremony, Exhibition, Changchun, China August 2023 (invited talk)

N. Koukourakis, J. Sun, J. Czarske, “Optical diffraction tomography based on AI-driven adaptive optical cell-rotation”, 22 August 2023, invited by Aydogan Ozcan and Giovanni Volpe, SPIE Optics + Photonics Conference 2023, San Diego, USA, August 2023 (invited talk)

R. Kuschmierz, “Inverting the complex valued transfer function of imaging waveguides for lensless endoscopy”, Photonics Global Conference, Stockholm, Sweden, August 2023 (invited)

L. Buettner, C. Bilsing, Z. Gao, J. Czarske, “Closed-Loop and Neural Network Aberration Correction Schemes for Correlation-Based Laser Velocimetry”, 16^th International Conference on Correlation Optics, 18.–21.09.2023, Chernivtsi/Ukraine (invited)

M. Kroll, E. Scharf, R. Stefan, M. Steinke,  J. Czarske, R. Kuschmierz, „Novel lensless fiber endoscopy by additive and subtractive femtosecond laser based manufacturing for
biomedicine”, Optics and Photonics Africa, 05.11.-10.11.2023, White River, South Africa (invited)

J. Czarske, J Sun, N Koukourakis, Computational Fiber-optical Communicationand Sensing exploiting AI, (invited by ChaoYang Lu), 2023, International Conference on Quantum Photonics (QPhotoniX 2023), November 24-27, 2023 in Jinhua, China.

Q. Zhang, Y Sui, J Czarske, “Intelligent Integrated Fiber Optic Communication and Sensing” Invited by ChaoYang Lu, International Conference on Quantum Photonics (QPhotoniX 2023), November 24-27, 2023 in Jinhua, China.

J. Sun, J Czarske, N Koukourakis, Smart Multi-core Fiber Endoscopy for Optical Manipulation and 3D Imaging, Invited by ChaoYang Lu, International Conference on Quantum Photonics (QPhotoniX 2023), November 24-27, 2023 in Jinhua, China.

Invited talks (at seminars/workshops)

J Czarske, R Kuschmierz, N Koukourakis, “Novel lensless multicore fiber endoscopy for biomedicine”, SPIE-OPTICA Student Chapter of University of California at Berkeley, 28 January 2023 (invited talk)

J. Czarske, R Kuschmierz, N Koukourakis, S Rothe, “Advancing multicore fiber endoscopy and multimode fiber communication using deep learning and modern holography”, Orlando, Creol, June 2023 (invited talk at the SPIE-OPTICA Student Chapter)

J. Czarske, E Scharf, J Dremel, T Glosemeyer, R Kuschmierz, „Minimally invasive lensless multicore fiber endoscopy using 3D-printed holograms and deep learning for biomedicine”, Tucson, University of Arizona, Seminar of Wyant College of Optical Sciences, 3 February 2023 (invited talk)

J. Czarske, R. Kuschmierz, D. Pohle, X. Zhan, „Multicore and Multimode Fiber-based Lensless Imaging for Breakthroughs in Biomedicine, Communication and Quantum Key Distribution”, Institute for Photonics Chips, Invited by Distinguished Professor Min Gu, Executive Chancellor of the University Council at University of Shanghai for Science and Technology (USST), Shanghai, China, 9 August 2023

J. Czarske, T Glosemeyer, J Lich, J Sun, R Kuschmierz, N Koukourakis, „Computational Lensless Fiber Endoscopy using AI/ML/DNN and Digital Holography”, Shanghai AI Lab, Department of Artificial Intelligence, Optics and Electronics, Shanghai, China, 10 August 2023

J Czarske, Q Zhan, J Sun, “Computational lensless multicore and multimode fiber techniques using deep learning and wavefront shaping”, invited by Prof Guohai Situ, Shanghai Institute of Optics and Fine Mechanics, 390 Qinghe Road, Shanghai 201800, China, 11 August 2023 (award: The 70^th Qinghe Seminar of Chinese Academy of Sciences)

J Czarske, R Kuschmierz, N Noukourakis, J Sun, “Lensless multicore fiber endoscopy using deep learning, optical diffraction tomography for biomedicine”, Peking University, Beijing, China, 15 August 2023

J Czarske, R Kuschmierz, N Noukourakis, J Sun, “Computational lensless multicore fiber endoscopy using deep holography for biomedicine”, invited by Prof L Cao, Tsinghua University, Beijing, China, 16 August 2023 (honor of certificate for appreciation for cooperation and student exchange)

J Czarske, R Kuschmierz, L Buettner, N Koukourakis, J Sun, “Computational imaging using adaptive optics, deep neural networks and entangled photons for biomedicine and communication”, invited by Pan Feng, Beihang University, Beijing, China, 17 August 2023

Z. Dou, L. Tropf, H. Hoster, H. Schmidt, J. Czarske, D. Weik, „Advanced Ultrasonic Diagnostic Technology Towards Green Hydrogen Energy Systems”, 2023 IEEE International Ultrasonics Symposium (IUS), Montreal, Canada, Sep. 2023, Student Paper Award Finalist and mentioned conference highlight.

Q Zhang, J Czarske, “AI-based Demultiplexing for Multimode Fiber Communication and Quantum Technology“, Chengdu, November 28, 2023 (invited by Zeyu Gao)

J. Czarske, Q Zhang, T Glosemeyer, N Koukourakis, L Buettner, “Computational lensless imaging using AI, digital holography, adaptive optics and wavefront shaping”, Chengdu, November 28, 2023 (invited by Zeyu Gao)

J Czarske, Q Zhang, D Pohle, „Computational Multimode Fiber Imaging and Communication”, Tucson, University of Arizona, Computational Imaging Colloquium, Wyant College of Optical Sciences, 17 November 2023 (invited talk)

J. Czarske, Q Zhang, T Glosemeyer, R Kuschmierz, N Koukourakis, “Computational lensless multicore fiber endoscopy using deep learning and Quantum Technology of Second Generation”, invited by Prof Guohai Situ, Shanghai Institute of Optics and Fine Mechanics, 390 Qinghe Road, Shanghai 201800, China, 30 Nov 2023

J Czarske, D Pohle, T Glosemeyer, R Kuschmierz, N Koukourakis, “AI, Machine Learning and Deep Neural Networks in Optics for Sensing and Communication”, invited by Dr Wang and Dr Sun, Shanghai AI Lab, Department of Artificial Intelligence, Shanghai, 30 Nov 2023 (Honorary Speaker Award for conducting the 23rd StarRiver Talk of Shanghai AI Lab)

Q Zhang, J Czarske, “Intelligent Digital Demultiplexer for Structured Light in Multimode Fibers”, Shanghai AI Lab, Department of Artificial Intelligence, Shanghai, 30 Nov 2023 (invited by Dr Wang and Dr Sun)

International conferences (reviewed)

Dr. Jiawei Sun, N Koukourakis, JW Czarske (TU Dresden, German) (Oral) Title: “Physics-informed deep learning and multicore fibers towards high-resolution cell tomography”, Light Conference Week, Light Conference, Academic League, Prize Ceremony, Exhibition, Changchun, China August 2023

S. Rothe, D. Krause, Q. Zhang, D. Pohle, N. Koukourakis and J. Czarske, “Learning to control the complex light propagation through few-mode fiber without a reference wave”, CLEO San Jose // 8th May 2023

Jiawei Sun, Nektarios Koukourakis, Juergen W. Czarske, „3D cell rotation in multicore fiber-based optical diffraction tomography with isotropic resolution using deep learning”, SPIE Optics and Photonics, San Diego, USA, 22 August 2023

Elias Scharf, Martin Kroll, Jürgen Czarske*, Robert Kuschmierz, “Additive and subtractive manufacturing of multi-core fibers for lensless endoscopy,” LIM 2023 Munich, WLT, 2023

Jiawei Sun*, Nektarios Koukourakis and Jürgen W. Czarske, “Learning-based quantitative phase imaging through an ultra-thin lens-free fiber microendoscope”, SPIE Photonics West, 2023 (Oral)

Willi G. Mantei, Jonas Wiedenmann, Benedikt Stender, Elias Scharf, Robert Kuschmierz, Jürgen Czarske, Lensless holographic endoscopes realized with direct laser writing, 2 March 2023

R Kuschmierz, E Scharf, J Dremel, K Zolnacz, R Stephan, M Steinke, ..., J Czarske, 3D micro-endoscopy enabled by 2-photon polymerization and advanced fiber design (Conference Presentation), Adaptive Optics and Wavefront Control for Biological Systems IX, PC123880C, 2023

J Sun, N Koukourakis, JW Czarske, Image quality enhancement for ultra-thin lensless multi-core fiber phase endoscopes, Quantitative Phase Imaging IX 12389, 16-21 2023

T Glosemeyer, J Lich, R Kuschmierz, J Czarske, Step-by-step transfer function reversal for single-shot 3D fiber endoscopy using a diffuser, Three-Dimensional and Multidimensional Microscopy: Image Acquisition and …, SPIE, San Francisco (2023)

N Koukourakis, L Liebig, JW Czarske, Impulsive stimulated Brillouin microscopy for high-speed biomedical diagnostics (Conference Presentation), Optical Elastography and Tissue Biomechanics X, PC1238109 2023

R Stephan, E Scharf, K Zolnacz, K Hausmann, M Ließmann, L Kötters, ..., J Czarske, Aperiodic multi-core fibers for lens-less endoscopy, Optical Fibers and Sensors for Medical Diagnostics, Treatment and … 2023

J Dremel, E Scharf, T Wang, S Richter, O Uckermann, W Polanski, I Eyüpoglu, J Czarske, R Kuschmierz; Autofluorescence based in vivo endoscopy for brain tumour diagnosis; SPIE ECBO 2023

J Gürtler, S Tasmany, R Kuschmierz, J Woisetschläger, J Czarske, Neural network based tomographic reconstruction of high-speed interferometric and Schlieren image data for density and velocity detection, SPIE Optical Metrology 2023, Munich

D Pohle, F A Barbosa, F F Ferreira, J Czarske, S Rothe, Intelligent self-calibration tool for digital few-mode fiber multiplexers based on multiplane light conversion, SPIE Digital Optical Technologies 2023, Munich

F Schmieder, L Büttner, W Derks, O Bergmann, J Czarske , Simultaneous optogenetic stimulation and inhibition using fast ferroelectric spatial light modulators and digital holograms; SPIE Digital Optical Technologies 2023, Munich

E Jorswieck, PH Lin, P, Nowitzki, D Pohle, J Czarske, “Secret Key Generation for Physical Layer Security Exploiting Multi-Mode Fiber Transmission”, IEEE international Workshop on Information Forensics and Security 2023, Montpellier (submitted)

K. Schmidt, N. Guo, W. Wang, J. Czarske, N. Koukourakis, „Chromatic aberration correction using reinforcement learning“, SPIE Optics+Photonics 2023, Emerging toptics in artificial intelligence, San Diego

Qian Zhang, Yuan Sui, Dennis Pohle, Nektarios Koukourakis, Jürgen W. Czarske, Stefan Rothe, TU Dresden (Germany), “Reference-less phase retrieval of multimode fibers using a deep neural network” 23 August 2023, Conv. Ctr. Room 6C, 12655-44, SPIE Optics+Photonics 2023, Emerging toptics in artificial intelligence, San Diego, 2023

Clemens Bilsing, Lars Büttner, Sebastian Burgmann, Bergische Univ. Wuppertalm Jürgen W. Czarske, “High-speed 3D particle tracking with dynamic aberration correction using a Fresnel guide star”, 21 August 2023, Conv. Ctr. Room 6E, SPIE Optics+Photonics 2023, Unconventional Imaging, Sensing, and Adaptive Optics, San Diego, 2023

J. Lich, T. Wollmann, R. Kuschmierz, M. Gude, J. Czarske, „Optical sensor for localized damage detection and modal analysis on fast rotating fiber reinforced polymer structures“, SPIE Optical Metrology 2023, Munich

Elias Scharf, Ronja Stephan, Kinga Zolnacz, Michale Steinke, Robert Kuschmierz, Jürgen Czarske, “Lensless Single-Shot Endoscopy With Needle-Thin Multicore Fiber Bundles Enabled by 2PP 3D Printing on the Fiber Tip”, Optica Imaging Congress, Boston, 2023

D. Weik, Z. Dou, H. Emmerich, J. Czarske, „Dual Channel Ultrasound Imaging Using a Time Reversal Virtual Array and an External Angle-Dependent Resonator – EAR”, 2023 IEEE International Ultrasonics Symposium (IUS), Montreal, Canada, Sep. 2023

H. Emmerich, L. Knüpfer, S. Heitkam, K. Eckert, D. Weik, J. Czarske, „The metrological challenge of monitoring froth processes – a numerical approach to model sound propagation in foam”, International Congress on Ultrasonics (ICU), Beijing, China, Sep. 2023

Z. Dou, L. Tropf, H. Hoster, H. Schmidt, J. Czarske, D. Weik, „Ultrasonic lamb waves based high-resolution droplet microscopy for proton exchange membrane fuel cells applications”, International Congress on Ultrasonics (ICU), Beijing, China, Sep. 2023

T. Glosemeyer, J. Lich, R. Kuschmierz, J. Czarske, “Diffuser-based fiber endoscopy for single-shot 3D fluorescence imaging”, EOSAM, Dijon, France, 14^th September 2023

Q. Zhang, Y. Sui, S. Rothe, J. Czarske, “Physics-informed mode decomposition neural network for structured light in multimode fibers”, 2023 IEEE Photonics Conference (IPC), Optical AI and Computational Photonics I, MG1: Photonic Neural Networks, 13 November 2023, Orlando, 2023

D. Pohle, F. A. Barbosa, F. M. Ferreira,, S. Rothe, Juergen Czarske, Digital few-mode fiber multiplexer using multiplane light conversion, 2023 IEEE Photonics Conference (IPC), TuC3: SDM and Multiband Transmission, 14 November 2023, Orlando, 2023

Q. Zhan, Yuan Sui, S. Rothe, Juergen Czarske, Learning to demultiplex the superposition of spatial modes in multimode fiber using physics-informed deep learning, Frontiers in Optics + Laser Science - OPTICA, FiO, FTu1D.3, Advancement in Optical Fibers, October 2023, Tacoma/Seattle

D. Pohle, F. A. Barbosa, F. M. Ferreira,, S. Rothe, Juergen Czarske, Smart Few-Mode Fiber Multiplexer using Multiplane Light Conversion, Frontiers in Optics + Laser Science FiO - OPTICA, FM1C.3,  Optical Instrumentation, October 2023, Tacoma/Seattle

National conferences (reviewed) and Talks (at seminars/workshops)

D. Pohle, S. Rothe, F. A. Barbosa, F. M. Ferreira, J. Czarske, „Novel architectures for quantum communication by Smart Adaptive All-Optical Mode Multiplexers“, QR.X Workshop, Bonn, March 2023

A. Geppert, D. Pohle, J. Czarske, S. Rothe, „Digitale optische Modenprogrammierung für räumliches Multiplexing von Quantenzuständen“, 124. DGaO Jahrestagung, Berlin, Juni 2023

F. Bürkle, G. Lecrivain, R. Maestri, J. Czarske, L. Büttner, “Investigation of the flow inside a Taylor bubble in a tube with a short constriction”, 19th Multiphase Flow Conference, 2023

G. Hartl, F. Schmieder, L. Büttner, J. Czarske, „Optogenetics Research with Human Stem Cell-Derived Cardiomyocytes and Neural Networks, PoL Bio-Image Analysis Symposium, August 2023, Poster

E. Scharf, R. Stephan, M. Steinke, R. Kuschmierz, J.Czarske, „Nadelförmiges linsenloses holografisches Endoskop – HoloScope“, F.O.M.-Konferenz 2023, online (Berlin), Nov. 2023

F. Bürkle, A. Bashkatov, A. Babich, X. Yang, K. Eckert, J. Czarske, L. Büttner, „ Measurement of the internal flow in hydrogen bubbles using a model-based aberration correction”, Beitrag 12, 30. Fachtagung “Experimentelle Strömungsmechanik”, München, 5.-7.9.2023

Book Chapters and Books

Stefan Rothe, “Harnessing Disorder of Multimode Fibres to Achieve Information Security on the Physical Layer”, Band: 20, Reihe: Dresdner Berichte zur Messsystemtechnik, ISBN 978-3-8440-9123-6, Englisch, Paperback, 198 Seiten, 2023

J. Sun, “Learning-based Three-Dimensional Optical Cell Rotation Tomography and Quantitative Phase Imaging Using Multi-Core Fibers”, Band: 19, Reihe: Dresdner Berichte zur Messsystemtechnik, ISBN 978-3-8440-9052-9, Englisch, Paperback, 158 Seiten, 2023

F. Bürkle, „Untersuchung interferometrischer Messtechniken zur hochauflösenden Geschwindigkeits- und Temperaturprofilmessung für Fluide in Brennstoffzellen“, Band: 18, Reihe: Dresdner Berichte zur Messsystemtechnik, ISBN 978-3-8440-8951-6, Deutsch, Paperback, 128 Seiten, 2023

Publications in journals 2020 - 2022

SCI-Publications in journals with peer review process

F. Schmieder, L. Büttner, T. Hanitzsch, V. Busskamp, J. Czarske, “Two-Wavelength Computational Holography for Aberration-Corrected Simultaneous Optogenetic Stimulation and Inhibition of In Vitro Biological Samples” Applied Science 12, 2022

K. Schmidt, N. Koukourakis, J.W. Czarske, “Assignment of Focus Position with Convolutional Neural Networks in Adaptive Lens Based Axial Scanning for Confocal Microscopy”, Appl. Sci. Vol (12), 661 (2022)

S. Burgmann, V. Kraemer, M. Dues, J. Steinbock, L. Büttner, J. Czarske, U. Janoske, “Flow-measurements in the wake of an oscillating sessile droplet using laser-Doppler velocity profile sensor”, Technical Measurements - Technisches Messen (2022)

L. Grüter, R. Nauber and J. W. Czarske, "Ultrasonic Bubble Imaging in Molten Salt Using a Multi-Mode Waveguide and Time Reversal", IEEE Transactions on Instrumentation and Measurement 71, 4501810, 2022.

F. Schmieder, R. Habibey, J. Striebel, L. Büttner, J. Czarske, V. Busskamp, “Tracking connectivity maps in human stem cell–derived neuronal networks by holographic optogenetics”, Life Science Alliance, 5(7): e202101268, 2022

O. Pätzold, K. Dadzis, C. Kirmse, D. Weik, L. Büttner, J. Czarske, A. Charitos, „Model experiments for melt flow in Czochralski growth of silicon”, Journal of Crystal Growth 588 (2022)

D. Weik, L. Grüter, D. Räbiger, S. Singh, T. Vogt, S. Eckert, J. Czarske, L. Büttner, „Ultrasound Localization Microscopy in Liquid Metal Flows”, Applied Sciences 12.9, 4517 (2022).

B Krug, N Koukourakis, J Guck, J Czarske, „Nonlinear microscopy using impulsive stimulated Brillouin scattering for high-speed elastography,“ Optics Express 30 (4), 4748-4758 (2022).

J. Sun, J. Wu, N. Koukourakis, L. Cao, R. Kuschmierz, J. Czarske, „Real-time complex light field generation through a multi-core fiber with deep learning”, Scientific Reports, volume 12, 7732 (2022)

Q. Zhang, S. Rothe, N. Koukourakis, J. Czarske, "Learning the matrix of few-mode fibers for high-fidelity spatial mode transmission", APL Photonics, 2022

C. Bilsing, H. Radner, S. Burgmann, J. Czarske, L. Büttner, “3D Imaging with Double-Helix Point Spread Function and Dynamic Aberration Correction Using a Deformable Mirror”, Optics and Lasers in Engineering 154, 107044 (2022)

J. Sun, J. Wu, S. Wu, R. Goswami, S. Girardo, J. Guck, L. Cao, N. Koukourakis, J. Czarske, “Quantitative phase imaging through an ultra-thin lensless fiber endoscope”, Light: Science and Applications of Nature Publishing (2022)

N Koukourakis, F Wagner, S Rothe, MO Karl, JW Czarske, “Investigation of human organoid retina with digital holographic transmission matrix measurements,” Light: Advanced Manufacturing 3 (1), 1-15, (2022)

J. Dremel, E. Scharf, R. Kuschmierz and J. Czarske. "Minimal invasive fiber optical endomicroscopy fort he medicine - Minimal-invasive faseroptische Endomikroskopie für die Medizin" tm - Technisches Messen - Proceedings, vol. 89, no. s1, 2022, pp. 25-30. https://doi.org/10.1515/teme-2022-0068

R. Habibey, J. Striebel, F. Schmieder, J. Czarske, V. Busskamp, ”Long-term morphological and functional dynamics of human stem cell-derived neuronal networks on high-density micro-electrode arrays”, Frontiers in Neuroscience 16, (2022).

S. Heckel, C. Bilsing, M. Wittmann, T. Gemming, L. Büttner, J. W. Czarske, J. Simmchen, “Beyond Janus Geometry: Characterization of Flow Fields around Nonspherical Photocatalytic Microswimmers”, Advanced Science, 9, 2105009 (2022)

Dennis Pohle, Stefan Rothe, Nektarios Koukourakis, Juergen W Czarske, "Surveillance of few-mode fiber-communication channels with a single hidden layer neural network", Optics Letters, Vol. 47 No. 3 (2022)

F. Bürkle, M. Förste, K. Dadzis, I. Tsiapkinis, O. Pätzold, A. Charitos, M. Dues, J. Czarske, L. Büttner, “Application of optical velocity measurements including a novel calibration technique for micron-resolution to investigate the gas flow in a model experiment for crystal growth”, Flow Measurement and Instrumentation, 102258, 2022

J. Wu, T. Wang, O. Uckermann, R. Galli, G. Schackert, L. Cao, J. Czarske, and R. Kuschmierz, "Learned end-to-end high-resolution lensless fiber imaging towards real-time cancer diagnosis," Sci Rep 12(1), 18846 (2022).

H. Emmerich, L. Knüpfer, S. Heitkam, E. Starke, P. Trtik, L. Schaller, D. Weik, J. Czarske, “Ultrasound imaging of liquid fraction in foam”,  IEEE Transactions on Instrumentation & Measurement, 2022

Invited talks at conferences (with proceedings)

J. Czarske, F. Schmieder, L. Buettner, “Real-Time Computational Holographic Optoelectronics Towards Paradigm-Shifting Biomedicine”, Summit on Semiconductors, Optoelectronics and Nanostructures, MARCH 23-25, 2022 (invited keynote plenary talk, United Arab Emirates-UAE), Dubai

R. Kuschmierz, J. Czarske, “Minimally invasive computational 3D lensless fiber endomicroscopy”, Quantitative Imaging for 3D Metrology; Optics and Photonics for Advanced Dimensional Metrology II, SPIE Photonics Europe, April 2022, Strasbourg (invited by Peter de Groot)

J. Czarske, N. Koukourakis, S. Rothe, F. Wagner, M. Karl, “Understanding neurodegeneration in human organoid retina with optical microscopy”, Advanced Microscopy and Imaging II; Biomedical Spectroscopy, Microscopy, and Imaging II; SPIE Photonics Europe, April 2022, Strasbourg (invited by Juergen Popp)

J. Czarske, R. Kuschmierz, “Lensless 3D fiber endoscopy using diffractive optical elements and deep learning”, SPIE Conference on Optical Technology and Measurement for Industrial Applications 2022 OPTM 2022, Tokyo Institute of Technology, (invited by Takeshi Hatsuzawa, Rainer Tutsch, Toru Yoshizawa, Yukitoshi Otani), Yokohama, Japan, 21 April 2022

J. Czarske, R. Kuschmierz, “Lensless Fiber Endoscopy Exploiting Deep Learning and Diffractive Optical Elements”, 3D Image Acquisition and Display - Optica Imaging and Applied Optics Congress / Optica Optical Sensors and Sensing Congress, 11 – 15 July 2022, Vancouver, British Columbia, Canada (invited by Bahram Javidi)

J. Czarske, R. Kuschmierz, “Lensless Near-Field Imaging with Enhanced Deep Super-Resolution Towards Real-Time Intraoperative Tumor Classification”, Optica Imaging and Applied Optics Congress / Optica Optical Sensors and Sensing Congress, 11 – 15 July 2022, Vancouver, British Columbia, Canada (invited by Zeev Zalewski)

R. Kuschmierz, J. Czarske, “Lensless Computational Endoscopy Using Digital Holography and Deep Learning”, Optica Digital Holography and Three-Dimensional Imaging, 01-04. August 2022, Cambridge, UK (invited by Daping Chu, Jae-Hyeung Park, Chau-Jern Cheng & Pietro Ferraro)

Nektarios Koukourakis, J W Czarske, „Investigation of Human Organoid Retina with Digital Holographic Transmission Matrix Measurements”, Optica Digital Holography and Three-Dimensional Imaging, 01-04. August 2022, Cambridge, UK (invited by Daping Chu, Jae-Hyeung Park, Chau-Jern Cheng & Pietro Ferraro)

L. Büttner, J. Czarske, H. Radner, C. Bilsing, Z. Gao, “Closed-Loop and Neural Network Aberration Correction Schemes using Fresnel Guide Stars for Microfluidics”, 25^th Congress of the International Commission for Optics (ICO) and the 16^th International Conference on Optics Within Life Sciences (OWLS), TS 13-3-02, Dresden, 5.–9. Sept. 2022 (invited by the international TPC)

Nektarios Koukourakis, Juergen W Czarske, „Investigation of human organoid retina with digital holographic transmission matrix measurements”, 25th Congress of the International Commission for Optics (ICO) and the 16th International Conference on Optics Within Life Sciences (OWLS), TS 13-3-02, Dresden, 5.–9. Sept. 2022 (invited by the international TPC)

R. Kuschmierz, E. Scharf, J. Czarske “Fast 3D micro endoscopic imaging using wavefront shaping and self-calibration”, 25th Congress of the International Comission for Optics (ICO) & 16th International Conference of Optics Within Life Sciences, September 2022, Dresden, Germany (invited by the international TPC)

Elias Scharf, Jakob Dremel, David Gonzaléz, Robert Kuschmierz, Juergen W Czarske, “Fiber endoscope using 3D printed diffractive optical elements for minimally invasive sensing and actuation in biomedicine“, invited by Alois Herkommer (Stuttgart University), EOS Annual Meeting (EOSAM) 2022, Porto, Portugal, 12.-16. September 2022 (invited talk)

J Czarske, R Kuschmierz, “Deep learning and 3D printed optics for lensless fiber endoscopy in biomedicine“, Frontiers in Optics 2022 + Laser Science (FiO/LS) Conference of OPTICA, FiO1-Fabrication, Design and Instrumentation, Rochester, USA (Invited by Prof Yuzuru Takashima, University of Arizona), 17 October 2022

J W Czarske, R Kuschmierz, “Lensless Multicore Fiber Endoscopy towards NeuroPhotonics”, Conference on Complex Media NeuroPhotonics, Maximus Resort, Brno, Czech Republic, Invited by Tomáš Čižmár (IPHT Jena and University of Brno), 24.-26 Oct 2022

R. Kuschmierz, J. Czarske, ”Lensless endoscopes enabled by 2-photon lithography and deep neural networks”, International Conference on Optical and Photonic Engineering, icOPEN November 2022, Nanjing, China

J. Czarske, F. Schmieder, L. Buettner, “Digitale Holographie in der Optogenetik mit aus Stammzellen gewonnenen neuronalen Netzwerken - Digital holography in optogenetics with neural networks derived from stem cells“ 16. Dresdner Sensor-Symposium 5-7 Dec 2022 (invited by Gerald Gerlach and Andreas Schütze)

J W Czarske, R Kuschmierz, N Koukourakis, “Paradigm-shifts in neuroscience using lensless 3D fiber endoscopy, deep learning and organoids”, Oasis 8 - International Conference and Exhibition on Optics and Electro-Optics, "Optical Engineering", invited by Dr. Hanni Inbar, David Intercontinental Hotel, Tel Aviv, Israel, 12th - 13th December 2022.

Juergen W. Czarske, Jiachen Wu, Tijue Wang, Tom Glosemeyer, Julian Andreas Lich, Robert Kuschmierz, „Learning-based high-resolution lensless fiber microendoscopy”, Proc. SPIE. PC12204, Emerging Topics in Artificial Intelligence (ETAI) 2022, invited talk, SPIE Optics+Photonics, San Diego, United States, Aug. 2022 (invited by A. Ozcan, UCLA, USA, and Giovanni Volpe, University of Gothenburg, Sweden)

J. Sun, J. Czarske, “Learning-based fiber endoscope for wavefront shaping and imaging”, Shanghai AI Laboratory, 2022

J. Sun, J. Czarske, “Smart multi-core fiber endoscope”, Institute of artificial intelligence, Hefei comprehensive national science center, 2022

J. Sun, J. Czarske, “Smart multi-core fiber endoscope for light field control and detection”, Institute of Biomedical Optics, University of Luebeck, Germany, 2022

J. Sun, J. Czarske, Multi-core fiber for light field control and detection”, Seminar of Chair for Photonics and Terahertz Technology at Ruhr University Bochum, Germany, 2022

Invited talks (at seminars/workshops)

J. Czarske, S. Rothe, “Smart Multimode Fiber Communication using Deep Learning”, University College London-UCL, London, UK (invited by Filipe Marques Ferreira), virtual presentation, 11 April 2022

J. Czarske, S. Rothe “What Optics can do to improve the security, latency and versatility of data information”, DGaO Ringvorlesung-General Lecture especially for Students and Postdocs (invited by Andreas Heinrich), 13 April 2022

J. Czarske, R Kuschmierz, “Exploiting Deep Learning and Lensless Optics for Paradigm Shifts in Biomedicine”, DDc Lunch Retreat, 14 April 2022 (invited by Dresden concept, Dresden Excellence Clusters, Prof Rödel)

J. Czarske, R Kuschmierz, N Koukourakis, “Exploiting Deep Learning and Lensless Optics for Minimally Invasive Endoscopy and Nonlinear Brillouin Microscopy,” (invited by Prof Uwe Morgner), University of Hannover, Excellence Cluster - PhoenixD Plenarkolloquium, in-person-presentation, 2 Mai 2022

J. Czarske, R Kuschmierz, “Exploiting Deep Learning and Lensless Optics for Intraoperative Real-Time Diagnostics and Optogenetics”, Excellence Cluster - BrainLinks-BrainTools, Intelligent Machine-Brain Interfacing Technology, Albert-Ludwigs-Universität Freiburg, 19 May 2022 (invited by Prof Thomas Stieglitz)

J. Czarske, S. Rothe, “Physical Layer Security exploiting the Transmission Matrix of Multimode Fibers”, 23 May 2022, University College London, UCL, London, UK (invited by Polina Bayvel)

R. Kuschmierz, J Czarske, “Minimally invasive endoscopy”, 05 August 2022, University of Nottingham, UK (invited by George Gordon)

J W Czarske, R Kuschmierz, “Exploiting Deep Learning and Lensless Multi-core Fiber Endoscopy for Paradigm Shifts in Cancer Diagnostics”, IUSL/Optica Physics Colloquium, INSTITUTE FOR ULTRAFAST SPECTROSCOPY AND LASERS, City University New York, invited by the Optica Student Chapter of CCNY and R. Alfano, New York City, 20 October 2022

J W Czarske, R Kuschmierz, N Koukourakis, “Exploiting Deep Learning, Digital Holography, Lensless Fiber Endoscopy, and Stem-cell-derived Organoids for Paradigm Shifts in Biomedicine”, Columbia University New York, invited by the SPIE-Optica Student Chapter, 21 October 2022

J W Czarske, R Kuschmierz, L Buettner, N Koukourakis, „Neuartige optische Messtechniken für die Biomedizin-Novel optical metrology towards biomedicine“, University of Rostock, 2 November 2022

R Kuschmierz, „Linsenlose 3D-Endoskopie mit Sub-mm-Durchmesser für die Biophotonik durch Korrektur der Übertragungsfunktion optischer Bildwellenleiter“, 648. VDE Elektrotechnisches Kolloquium, TU Dresden, 26 October 2022

Juergen W. Czarske, Jiachen Wu, Tijue Wang, Tom Glosemeyer, Julian Andreas Lich, Robert Kuschmierz, „Exploiting Deep Learning and Lensless Fiber Optics for Paradigm Shifts in Biomedicine and Communication”, UCLA, Workshop on Photonics and Deep Learning meets Biomedicine, Aug. 2022 (invited by A. Ozcan)

International conferences (reviewed)

R. Kuschmierz, J. Lich, T. Glosemeyer, E. Scharf, J. Czarske, "Minimally invasive 3D endoscopy using diffractive optical elements and deep learning", Endoscopic Microscopy XVII, SPIE BIOS, January 2022, San Francisco

W. Mantei, B. Stender, J. Wiedenmann, E. Scharf, R. Kuschmierz, J. Czarske, „Needle-shaped lensless holographic endoscopes realized with TPP“, Optical Fibers and Sensors for Medical Diagnostics, Treatment and Environmental Applications XXII, SPIE BIOS, January 2022, San Francisco

S. Rothe, K. Besser, N. Koukourakis, E. Jorswieck, J. Czarske, “Confidential optical data transmission through multimode fibres based on holographic transmission matrix measurements”, Advanced Methods: Digital Holography I; Unconventional Optical Imaging III, SPIE Photonics Europe, April 2022, Strasbourg

T. Glosemeyer, Y. Zheng, J. Lich, R. Kuschmierz, J. Czarske, „Multispectral image reconstruction with neural networks for minimally invasive 3D lensless fiber endoscopy using a diffuser”, Advanced Methods: Wavefront Sensing; Unconventional Optical Imaging III, SPIE Photonics Europe, April 2022, Strasbourg

E. Scharf, R. Kuschmierz, R. Stephan, M. Steinke, J. Czarske, „Needle-size fibre endoscope with 3D printed DOEs for minimally invasive procedures in biomedicine”, Advanced Microscopy and Imaging I, Biomedical Spectroscopy; Microscopy, and Imaging II; SPIE Photonics Europe, April 2022, Strasbourg

J. Gürtler, R. Kuschmierz, J. Czarske, „Minimally invasive lensless fiber endoscopy using distal holographic image formation for technical inspections and biomedicine”, Optical Micro- and Nanometrology; Optics and Photonics for Advanced Dimensional Metrology II; SPIE Photonics Europe, April 2022, Strasbourg

J. Wu, R. Kuschmierz, O. Uckermann, R. Galli, G. Schackert, L. Cao, J. Czarske, „Learning-based high-resolution lensless fiber bundle imaging for tumor”, Computing, Modelling, Design: AI for Biomed; Unconventional Optical Imaging III; SPIE Photonics Europe, April 2022, Strasbourg

Ilenia Meloni, Divya Sachidanandan, Andreas S. Thum, Robert J. Kittel, Jürgen Czarske, Michael Mertig, and Caroline Murawski, “Spatial light patterns using smartphone optogenetics for behavioral control of Drosophila melanogaster larvae”, 7th International Workshop on Technologies for Optogenetics and Neurophotonics - OPTOGEN2022, Paris, France, May 11-13, 2022

Z. Gao, P. Yang, C. Bilsing, J. Czarske, L. Büttner, “Distortion Correction in Particle Image Velocimetry for Measurements Through Fluctuating Interfaces using a Deep Neural Network and Wavefront Sensing”, 20th International Symposium on Applications of Laser and Imaging Techniques to Fluid Mechanics, contribution #39, 11–14 July 2022, Lisbon/Portugal

S. Pasch, R. Leister, M. Egner, L. Büttner, J. Czarske, J. Kriegseis, “Comparative accuracy study of LDV profile-sensor acquisition modes and particle diameters”, 20th International Symposium on Applications of Laser and Imaging Techniques to Fluid Mechanics, contribution #113, 11–14 July 2022, Lisbon/Portugal

C. Bilsing, H. Radner, L. Büttner, J. Czarske, “Particle Tracking Velocimetry with Dynamic Aberration Correction for 3D Flow Measurements Through Fluctuating Phase Boundaries”, 20th International Symposium on Applications of Laser and Imaging Techniques to Fluid Mechanics, 11–14 July 2022, Lisbon/Portugal

F. Schmieder, R. Habibey, V. Busskamp, J.W. Czarske, L. Büttner, “Adaptive Holographic Optogenetic Illumination for Human Neural Network Analysis”, OPTICA Digital Holography and Three-Dimensional Imaging, W4A.7, 01.–04.08.2022, Cambridge/UK

J. Sun, N. Koukourakis and J. W. Czarske, “3D cell-rotation using multi-core fiber-based lab-on-a-chip for optical tomography”, Optical Trapping and Optical Micromanipulation XIX, SPIE Optics+Photonics, San Diego, United States, Aug. 2022

C.Bilsing, H. Radner, L. Buettner, JW Czarske, ”Dynamic aberration correction using a deformable mirror and double-helix point spread function for flow metrology”, Unconventional Imaging and Adaptive Optics 2022 – SPIE, SPIE Optics+Photonics, San Diego, United States, Aug. 2022

Z. Gao, H. Radner, L. Büttner, C. Bilsing, P. Yang, J. Czarske, “Aberration Correction for Imaging Metrology Using Deep Convolutional Neural Networks”, 25^th Congress of the International Commission for Optics (ICO) and the 16^th International Conference on Optics Within Life Sciences (OWLS), poster PO-23, Dresden, 5.–9. Sept. 2022

F. Schmieder, R. Habibey, V. Busskamp, L. Büttner, J. Czarske, „Investigation of human neuronal networks using holographic stimulation system with high spatiotemporal resolution”, the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

K. Schmidt, W.Wang, N.Koukourakis, H.B. Gowda, M.C. Wapler, U. Wallrabe, J.W. Czarske “All-Adaptive Smart Microscopy using Machine Learning” the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

Q. Zhang, S. Rothe, N. Koukourakis, J. W. Czarske, “High Fidelity Mode Transmission via Few-mode Fiber using Deep Learning”, the  25th  Congress  of  the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

H.B. Gowda, M.C. Wapler, K. Schmidt, N. Koukourakis, J.W. Czarske, U.Wallrabe „High-Speed Tunable Aspherical Achromatic Lens“ the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

J. Sun, N. Koukourakis and J. Czarske, “Multi-Dimensional Cell Rotation with Multi-Core Fibers and Wavefront Shaping”, the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

D. Pohle, S. Rothe, F. A. Barbosa, F. M. Ferreira, N.Koukourakis, J. Czarske, “Intelligent Self Calibration Tool for Adaptive Mode Multiplexers using Multiplane Light Conversion”, 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

T. Wang, J. Wu, O. Uckermann, R. Galli, J. Czarske, R. Kuschmierz, “Single-shot high-resolution lensless fiber bundle imaging using deep learning for neurosurgery”, the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

S. Rothe, K.-L. Besser, N. Koukourakis, E. Jorswieck, J. Czarske, “Physical layer security for confidential data transmission through multimode fibres”, the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

W. Wang, F. Lemke, U. Wallrabe, M. Wappler, J. Czarske, and N. Koukourakis, "3D scanning microscopy for zebrafish imaging using adaptive prisms and lenses", the 25th Congress of the International Commission for Optics (ICO), Dresden, Germany, Sep. 2022

J. Lich, T. Glosemeyer, R. Kuschmierz, J. Czarske, „Diffusor Endoscope using Neural Networks for 3D-Single-Shot-Image Reconstruction“, EOS Annual Meeting (EOSAM) 2022, Porto, Portugal, 12.-16. September 2022

D. Weik, L. Grüter, D. Räbiger, S. Singh, T. Vogt, S. Eckert, J. Czarske, "Ultrasound Localization Microscopy by Nonlinear Adaptive Beamforming – a Case Study for Super-Resolved Flow Fields in Liquid Metal Experiments", 2022 IEEE International Ultrasonics Symposium (IUS), Venice, Italy, Oct. 2022.

Z. Dou, L. Grüter, D. Weik, J. Czarske, "Ultrasound Tracking of Gas Bubbles Through a Multi-Mode Waveguide in Hot Melts", 2022 IEEE International Ultrasonics Symposium (IUS), Venice, Italy, Oct. 2022.

J. Zhang, J. Sun, N. Koukourakis and J. Czarske, “Lensless microendoscope: ultra-thin nanoscale surface imaging probe”, icOPEN 2022, Nanjing, China, Nov. 2022

J. Sun, N. Koukourakis and J. W. Czarske, “Real-time quantitative phase imaging through a multicore fiber using deep learning”, SPIE Photonics Asia, Nov. 2022

T. Wang, J. Dremel, J. Wu, O. Uckermann, R. Galli, G. Schackert, J. Czarske, R. Kuschmierz, “High-resolution imaging with multi-core fibers and deep neural networks (DNNs) for cancer diagnostics”, Complex Media NeuroPhotonics (CMNP) workshop, poster, Brno, 24.–27. Oct. 2022

J. Dremel, S. Richter, T. Wang, G. Schackert, J. Czarske, W. Polanski, R. Kuschmierz, O. Uckermann, „BrainAce: In vivo label-free tumor classification“, EKFZ, InnoDays 2022 in Dresden
23-24.09.2022

Jiawei Sun*, Nektarios Koukourakis and Jürgen W. Czarske, “3D cell-rotation using multi-core fiber-based lab-on-a-chip for optical tomography”, SPIE Optics+Photonics, 2022 (Oral)

National conferences (reviewed) and Talks (at seminars/workshops)

H. Emmerich, L. Knüpfer, P. Trtik, K. Eckert, S. Heitkam, D. Weik, L. Büttner, J. Czarske,
“Planar mapping of the liquid fraction of froth using a 1.5 D ultrasound array”, Sensoren und Messsysteme 2022, 21. ITG / GMA – Fachtagung, 10.-11. Mai 2022

J. Dremel, E. Scharf, J. Czarske, R. Kuschmierz, „Linsenlose Real-Time-Faserbündel-Endoskopie mittels digitaler optischer Phasenkompensation für die Biomedizin“, 123. Jahrestagung der DGaO in Pforzheim, 7. - 11. Juni 2022

K.Schmidt, H. B. Gowda, U. Wallrabe, J.W. Czarske, N. Koukourakis „Adaptiver Achromat zur Korrektur chromatischer Aberrationen“ 123. Jahrestagung der DGaO in Pforzheim, 7. - 11. Juni 2022

D. Pohle, S. Rothe, N.Koukourakis, J. Czarske, “Surveillance of Multimode Fiber Network using Deep Learning”, 123. Jahrestagung der DGaO in Pforzheim, 7. - 11. Juni 2022

L. Grüter, D. Weik, J. Czarske, "Ultraschall-Tracking von Gasblasen durch einen Multimode-Wellenleiter in heißen Schmelzen", Workshop Messtechnische Anwendungen von Ultraschall, Ilsenburg, July 2022.

F. Bürkle, G. Lecrivain, R. Maestri, U. Hampel, J. Czarske, L. Büttner, „Untersuchung der Innenströmung einer Taylorblase mit einem neuartigen PIV-System mit deformierbarem Spiegel“, Beitrag 5, Ilmenau, 6.–8.09.2022

C. Bilsing, L. Büttner, J. Czarske, U. Janoske, S. Burgmann, „3D-PTV-Messung in einem oszillierenden Tropfen mittels Doppelhelix-Punktspreizfunktion“, Beitrag 8, Ilmenau, 6.–8. Sept. 2022

E. Scharf, R. Kuschmierz, J. Czarske, „Nadelförmiges linsenloses holografisches Endoskop - HoloScope“, DGaO Summer School in Aalen, 12.-16. Sept. 2022

J. Dremel, E. Scharf, T. Wang, R. Kuschmierz, J. Czarske, „Minimal-invasive faseroptische Endomikroskopie für die Medizin - Minimally invasive fiber optic endomicroscopy for medicine“, XXXVI. Messtechnisches Symposium of AHMT, Magdeburg, 28. -29. Sept. 2022

E. Scharf, R. Kuschmierz, R. Stephan, M. Steinke, D. Ristau, J. Czarske, „Holoscope - Nadelförmiges linsenloses holografisches Endoskop“, F.O.M.-Konferenz in Berlin, 8.-9. Nov.2022

L. Grüter, C. Bilsing, H. Radner, D. Weik, J Czarske, “PtvPy 0.10.2 - A free and open-source command line tool and Python library for particle tracking velocimetry”, Version 0.10.2, 2022. doi: 10.5281/zenodo.6389891.

Workshops (without review)

F. Schmieder, L. Büttner, J. Czarske, “Optogenetics Research with Human Stell Cell-Derived Cardiomyocytes and Neural Networks”, Poster, Excellence Cluster Physics of Life Christmas Symposium, 15.12.2022

J. Sun, R. Kuschmierz, N. Koukourakis and J. W. Czarske, “Optical computational tomography of single cells using fiber-optic cell rotation”, Poster, Excellence Cluster Physics of Life Christmas Symposium, 15.12.2022

R Kuschmierz,…. J. Czarske, “3D Fiber Endoscopy…”, Poster, Excellence Cluster Physics of Life Christmas Symposium, 15.12.2022

Patents and Patent Applications

U. Teicher, A. B. Achour, S. Ihlenfeldt, D. Weik, L. Büttner, R. Nauber, J. Czarske, T. Schröder, G. Lauer, „Ultraschallsystem und Verfahren zum Erstellen eines Ultraschallbildes“, German Patent Application DE10 2022 106 875, 2022.

Book Chapters and Books

J. Gürtler, 3D-Bildgebung mittels kamerabasierter Hochgeschwindigkeitsvelozimetrie und
-interferometrie unter Nutzung tomografischer Rekonstruktion mit neuronalen Netzen - 3D imaging using camera-based high-speed velocimetry and interferometry using tomographic reconstruction with neural networks, Dissertation, Shaker-Verlag, Dresdner Berichte zur Messsystemtechnik Nr. 17, Aachen, 2021

SCI-Publications in journals with peer review process

H. Radner, J. Stange, L. Büttner, J. Czarske, “Field programmable system-on-chip based control system for real-time distortion correction in optical imaging”, IEEE Transactions on Industrial Electronics 68(4), 3370-3379, 2021

Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen, “In situ measurement of the isoplanatic patch for imaging through intact bone”, Journal of Biophotonics, e202000160, “cover page of the journal”, 2021

S. Rothe, Q. Zhang, N. Koukourakis, J. Czarske, “Intensity-only Mode Decomposition on Multimode Fibers using a Densely Connected Convolutional Network”, OSA/IEEE Journal of Lightwave Technology, DOI: 10.1109/JLT.2020.3041374, 2021

S. Burgmann, M. Dues, B. Barwari, J. Steinbock, L. Büttner, J. Czarske, U. Janoske, “Flow-measurements in the wake of an adhering and oscillating droplet using laser Doppler velocity profile sensor”, Exp. Fluids 62, 47, 2021

D. Weik, R. Nauber, C. Kupsch, L. Büttner, J. Czarske “Uncertainty Quantification of Ultrasound Image Velocimetry for Liquid Metal Flow Mapping”, IEEE Transactions on Instrumentation and Measurement (70) 2021, Art no. 1006211.

Wenjie Wang, Florian Lemke, Matthias Wapler, Ulrike Wallrabe, Juergen Czarske, “3D-scanning microscopy with adaptive lenses and prisms for zebrafish studies", SPIE Journal of Optical Microsystems (invited by Hans Zappe), 2021

J. Sun, N. Koukourakis, J. Czarske, "Complex Wavefront Shaping through a Multi-Core Fiber", Applied Sciences 11(9):3949. https://doi.org/10.3390/app11093949, 2021

J. Sun, N. Koukourakis, J. Guck, J. Czarske, "Rapid computational cell-rotation about arbitrary axes in 3D with multi-core fiber", OSA Biomed. Opt. Express 12, 3423-3437 DOI:https://doi.org/10.1364/BOE.423035  (2021)

A. Filippatos, B. Grüber, J. Lich, T. Wollmann, B. Zhou, R. Kuschmierz, E. Koch, J. Czarske, M. Gude, “Design and testing of polar-orthotropic multi-layered composites under rotational load”, Materials & Design, Vol. 207, https://doi.org/10.1016/j.matdes.2021.109853. 2021,

O Rothkamm, J Gürtler, J Czarske, R Kuschmierz, „Dense U-Net for Limited Angle Tomography of Sound Pressure Fields“, Applied Sciences 11 (10), 4570, https://doi.org/10.3390/app11104570 , 2021

J. Lich, T. Wollmann, A. Filippatos, M. Gude, J. Czarske, R. Kuschmierz, "Spatially Resolved Experimental Modal Analysis on High-Speed Composite Rotors Using a Non-Contact, Non-Rotating Sensor." Sensors 21.14 (2021): 4705, 4705, https://doi.org/10.3390/s21144705

R. Kuschmierz, E. Scharf, D. F. Ortegón-González, T. Glosemeyer, J. Czarske. Ultra-thin 3D lensless fiber endoscopy using diffractive optical elements and deep neural networks, Light: Advanced Manufacturing of Nature Publishing. doi: 10.37188/lam.2021.030, invited by Prof Wolfgang Osten, (2021)

H. Emmerich, L. Schaller, R. Nauber, L. Knüpfer, S. Heitkam, J. Czarske, L. Büttner, “Linear, spatio-temporally resolved ultrasound measurement of the liquid fraction distribution in froth”, Technisches Messen 88 (9), 562-570  (2021)

Rothe, Stefan, Philipp Daferner, Sebastian Heide, David Krause, Felix Schmieder, Nektarios Koukourakis, and Jürgen W. Czarske. "Benchmarking analysis of computer generated holograms for complex wavefront shaping using pixelated phase modulators." OPTICA Optics Express 29(23), 37602-37616 (2021)

Z. Gao, H. Radner, L. Büttner, H. Ye, X. Li, J. Czarske, "Distortion correction for particle image velocimetry using multiple-input deep convolutional neural network and Hartmann-Shack sensing," OSA Optics Express 29, 18669-18687 (2021)

F. Bürkle, J. Czarske, L. Büttner, “Simultaneous velocity profile and temperature profile measurements in microfluidics”, Flow Measurement and Instrumentation, 102106 (2021)

Invited talks at conferences (with proceedings)

J. Czarske, B.Krug, F. Rottmann, N. Koukourakis, “Paradigm-Shifting BioBrillouin Microscopy with Impulsive Stimulated Scattering” (invited by Kareem Elsayad, VBCF, Vienna, AT), 5th EU-COST-BioBrillouin Meeting (BBM5): 12-14th October 2021

J. Czarske, J. Sun, N. Koukourakis, “3D Cell-Rotation using Multi-Core Fiber-based Lab-on-a-Chip and Wavefront Shaping”, Invited Talk, SPIE Optics + Photonics 2021, Nanoscience + Engineering Applications, Optical Trapping and Optical Micromanipulation XVIII (invited by Gabriel C. Spalding, Illinois Wesleyan Univ., United States), San Diego, 1-5 Aug. 2021

J. Czarske, S. Rothe, N. Koukourakis “Digitally programmable light: Paradigm shifts in biomedicine”, Conference OPTO 2021, plenary talk, http://opto.edu.pl , invitation by Karolina Stefańska, President of Wrocław Univ. SPIE Student Chapter, Poland, virtual event, 12th - 15th of July 2021

J. Czarske, S. Rothe, N. Koukourakis “Quantum Communication and Post-quantum Cryptography – Physical Layer Security with Multimode Fibers using Densely Connected Convolutional Network”, Plenary Invited Talk, 4th International Conference focusing on Telecommunications and Photonics of Bangladesh University of Engineering and Technology (BUET), Dhaka, Bangladesh (invited by Aziz Rahman, City University, London, UK), 22-24th December 2021

J. Sun, J. Czarske, “Real-time Program-controlled Cell Rotation using Structured Light”, SPIE Student Chapter Webconference of South Africa and Germany, 2021

J. Sun, J. Czarske, “Real-time controlled cell-rotation in 3D with a phased-array optical manipulator”, Virtual Photonic Workshop, A joint event of the SPIE Student Chapter TU Dresden and Wroclaw University of Science and Technology, 2021

Invited talks (at seminars/workshops)

J. Czarske, “Paradigm-shifting computational laser imaging for biomedicine”, Invited Seminar Presentation of Optics and Photonics Society (OPSI) of Iran  (invited by Ali-Reza Moradi, Institute for Advanced Studies in Basic Sciences, Zanjan, Iran), June 3rd, 2021

J. Czarske “Computational Adaptive Laser Metrology for Biomedicine”, Ringvorlesung-German Lectures on Optics, invited by Prof Andreas Heinrich, Aalen/DGaO, 31 March 2021

F. Bürkle, J. Czarske “Investigation of interferometric measurement techniques for simultaneous high-resolution velocity and temperature measurements in fluids of different refractive indices”, Institutskolloquium, Fachgebiet Technische Thermodynamik, TU Ilmenau, invited by Prof. Christian Cierpka, November 4^th, 2021

International conferences (reviewed)

L. Grüter, R. Nauber, C. Kupsch, J. Czarske, „Compensation of Strong Aberrations with a Time Reversal Virtual Array for Ultrasound Imaging“, Sensor and Measurement Science International (SMSI), 2021

Dennis Pohle, Stefan Rothe, Nektarios Koukourakis, and J¨urgen Czarske, “Surveillance of a Multimode Fiber Network using Deep Learning,” Conference OPTO, July 2021, Poland

David Gonzalez, R. Kuschmierz, J. Czarske, ”Phase compensation on coherent fibre bundles by means of 3D-printed phase masks”, Conference OPTO, July 2021, Poland

Q. Zhang, S. Rothe, N. Koukourakis, J. Czarske, „Multimode Fiber Transmission Matrix Inversion with Densely Connected Convolutional Network for Physical Layer Security“, Conference on Lasers and Electro-Optics (CLEO), 2021

J. Sun, N. Dunkelberg, N. Koukourakis, R. Kuschmierz, J. Czarske, J. Guck, "Multi-dimensional cell-rotation using multi-core fibers and wavefront shaping ", Quantitative Phase Imaging VII, SPIE Photonics West, 2021​

B. Krug, N. Koukourakis, J. Czarske, “Advancing impulsive stimulated Brillouin microscopy using a femtosecond laser for biomechanics”, Elastography and Tissue Biomechanics VII, SPIE Photonics West, 2021

E. Scharf, M. Sánchez, R. Kuschmierz, O. Schmidt, J. Czarske, “Minimally Invasive Fiber Endoscope with 3D Printed Diffractive Optical Element (DOE) for Biomedicine”, [Endoscopy, Sources, Fibers, Technology], OSA European Conferences on Biomedical Optics, 2021

J. Lich, T. Wollmann, R. Kuschmierz, A. Filippatos, M. Gude, J. Czarske, „Diffraction grating sensor for damage and modal analysis of fast rotating composite structures“, 11782-30, Optical Measurement Systems for Industrial Inspection XII, SPIE Optical Metrology, 2021

R. Stephan, M. Steinke, A. Rühl, R. Kuschmierz, K. Hausmann, M. Ließmann, D. Ristau, and J. Czarske, „Design studies of aperiodic multicore fibres for lensless endoscopy“, ePoster ETu2A.30, Advances in Microscopic Imaging, OSA European Conferences on Biomedical Optics, 2021

R. Kuschmierz, E. Scharf, J. Czarske, „Additive manufacturing for minimally invasive endomicroscopy“, Additive Manufacturing: Medical Applications, Lasers in Manufacturing, 2021

A. Filippatos, J. Lich, T. Wollmann, C. Schnabel, R. Kuschmierz, E. Koch, J. Czarske, M. Gude, “Comparison and combination of dynamic optical measurement systems for in-situ structural assessment of high-speed composite rotors”, 6^th International Conference of Engineering Against Failure (ICEAF), 2021

Hannes Emmerich, Richard Nauber, Lars Büttner, Leon Knüpfer, Sascha Heitkam and Jürgen Czarske: „In-situ ultrasonic characterization of froth for flotation”; 13^th International Symposium on Ultrasound Doppler Methods for Fluid Mechanics and Fluid Engineering (ISUD), 2021

D. Weik, R. Nauber, L. Büttner, J. Czarske, D. Räbiger, S. Singh, T. Vogt, S. Eckert, "Ultrasound Image Velocimetry with Adaptive Beamforming for Modal Measurements in Liquid Metal Convection," 2021 IEEE International Ultrasonics Symposium (IUS), 2021.

L. Grizewski, O. Rothkamm, J. Gürtler, F. Bake, J. Czarske und L. Enghardt, „Schalldruckmessungen mittels tomografischer laser-interferometrischer Vibrometrie“, DAGA - 47. Jahrestagung für Akustik, 2021

F. Schmieder, R Habibey, V. Busskamp, L. Büttner, J.W. Czarske, „Analysis of human iPSC-derived neuronal networks (hiPSCNN) using holographic single cell and full field optogenetic stimulation”, OSA Biophotonics Congress, 12.-16.04.2021, Virtual (2021)

F. Schmieder, R Habibey, V. Busskamp, L. Büttner, J.W. Czarske, „Correlation analysis of human iPSC-derived neuronal networks using holographic single cell and full field stimulation”, SPIE Photonics West, 6.-11.03.2021

Z. Gao, H. Ye, L. Büttner, J. Czarske, P. Yang, “Distortion Correction for Imaging-based Flow Measurement using Multiple-input Deep Learning Model”, poster presentation, International Conference on Computational Imaging (CITA), Hangzhou/China, 24.–26.09.2021

Z. Gao, P. Yang, H. Ye, L. Büttner, J. Czarske, X. Li, “Actuator-free distortion correction for image metrology based on deep learning and wavefront measurement”, poster presentation, The 5th Symposium on Atmospheric Optics and Adaptive Optics (AOAO), Hefei/China, 17.–19.10.2021

National conferences (reviewed) and Talks (at seminars/workshops)

E. Scharf, R. Stephan, M. Steinke, R. Kuschmierz, D. Ristau, and J. Czarske, „ Nadelförmiges linsenloses holografisches Endoskop “, ePoster,  F.O.M.-Konferenz 2021, 2021

C. Bilsing, H. Radner, L. Büttner, J. Czarske, „Neuartiges Lasermesssystem mit adaptiver Bildkorrektur unter Nutzung von helikalen Wellenfronten und eines deformierbaren Spiegels“, 122. Jahrestagung der DGaO in Bremen, Bremen, 21.–23.09.2021

F. Bürkle, L. Büttner, M. Dues, J. Czarske, „Gleichzeitige Temperatur- und Geschwindigkeits-profilmessung mit Mikrometerauflösung“, 28. GALA-Fachtagung „Experimentelle Strömungsmechanik“, Beitrag 5, Bremen, 7.–9.09.2021

C. Bilsing, H. Radner, L. Büttner, S. Burgmann, A. Metzmacher, J. Czarske, „Particle Tracking Velocimetry mit dynamischer Aberrationskorrektur für 3D-Strömungsmessungen in Tropfen mit dynamischer Oberfläche“, 28. GALA-Fachtagung „Experimentelle Strömungsmechanik“, Beitrag 7, Bremen, 7.–9.09.2021

K.Schmidt, N.Koukourakis, M.Wapler, U.Wallrabe, J.Czarske, „Adaptive optical elements & Machine Learning – The road to smart microscopy“, 122. DGaO Jahrestagung, Beitrag A34, Bremen, 21.-23.09.2021

S. Burgmann, M. Dues, J. Steinbock, L. Büttner, J. Czarske, U. Janoske, „Profilsensormessungen im Nachlauf eines oszillierenden Tropfens“, 28. GALA-Fachtagung „Experimentelle Strömungsmechanik“, Beitrag 28, Bremen, 7.–9.09.2021

Larisa Grizewski, Jürgen Czarske, Lars Enghardt, „Schalldruckmessungen mittels tomografischer laser-interferometrischer Vibrometrie“, DAGA 2021 - 47. Jahrestagung für Akustik, Sep 2021

E. Scharf, J. Czarske, “Minimally Invasive Fiber Endoscope with 3D Printed Diffractive Optical Element (DOE) for Biomedicine”, Presentation at YoungDGAO Summer School, Stuttgart, 3 August 2021

J. Lich, J. Czarske, “Diffusor based endoscopic imaging”, Presentation at YoungDGAO Summer School, Stuttgart, 3 August 2021

J. Czarske, “Computational Self-Parametrized Laser Systems for Biomedicine”, Presentation at SPIE Student Chapter Workshop of South Africa & Germany, online, 19 November 2021

J. Sun, J. Czarske, “Real-time Programm-controlled Cell Rotation using Structured Light”, Presentation at SPIE Student Chapter Workshop of South Africa & Germany, online, 19 November 2021

K. Schmidt, J. Czarske, “Smart Microscopy using Adaptive Lenses and Deep Learning”, Presentation at SPIE Student Chapter Workshop of South Africa & Germany, online, 19 November 2021

J. Lich, J. Czarske, “Miniaturized Diffusor Multicore-Fiber Endoscopy for 3D-Single-Shot-Imaging”, Presentation at SPIE Student Chapter Workshop of South Africa & Germany, online, 19 November 2021

Q. Zhang, J. Czarske, “Deep Learning for Multimode-fiber Communication and Quantum Technology”, Presentation at SPIE Student Chapter Workshop of South Africa & Germany, online, 19 November 2021

J. Dremel, E. Scharf, R. Kuschmierz, and J. Czarske, „Charakterisierung verschiedener Faserbündel für die Anwendung in einem optischen Zellrotator“ der Theodore-Maiman-Stipendium 2020 / WLT Mitgliederversamm-lung, 2021

Book Chapters and Books

H Radner, Adaptive optische Wellenfrontkorrektur unter Einsatz des Fresnel-Leitsterns und eines hybriden Regelkreises implementiert auf einem Field-Programmable System-on-Chip, Dissertation, Shaker-Verlag, Dresdner Berichte zur Messsystemtechnik Nr. 17, Aachen, 2021

Patent Applications

S. Heitkam, R. Nauber, L. Büttner, C. Kupsch, J. Czarske, „Verfahren und Anordnung zur ortsspezifischen Charakterisierung der Phasenzusammensetzung sowie der Strömungsverhältnisse innerhalb eines Schaumvolumens”, Deutsches Patent- und Markenamt, 2021

L Büttner, J Czarske, M Teich, N Koukourakis, „Arrangement and method for disturbance correction for imaging flow measuring processes”, US Patent App. 16/628,391 & Patent China, ZL201880046397.4, Number: CN 110914736 B, 2021

S. Rothe, Q. Zhang, N. Koukourakis, R. Kuschmierz, J. Czarske, „Referenzfreie Modendekomposition mit einem Neuronalen Netz bei einer hochmodigen Multimodefaser auf Basis reellwertiger Intensitätsverteilungen“, Deutsches Patent- und Markenamt, 2021

R. Kuschmierz, J. Czarske, "Verfahren und Anordnung zur adaptierten Beleuchtung eines Objekts mit Licht", Deutsches Patent- und Markenamt, 2021

L. Büttner, S. Heitkam, C. Kupsch, R. Nauber, J. Czarske: “Modellbasiertes Ultraschall-Messsystem für partikelbeladene Schäume “, 2021

R. Kuschmierz, E. Scharf, J. Czarske, " Optisches System und Bildgebungsverfahren", Deutsches Patent- und Markenamt, 2021

J. Czarske, N. Koukourakis „Verfahren zur Positionsbestimmung von Mikro- oder Nanorobotern in einem biologischen Gewebe, Mikro- oder Nanoroboter sowie Messanordnung - Method for determining the position of micro or nanobots in biological tissue, micro- or nanobots as well as measuring arrangements”, Patent, 2021

C. Kupsch, R. Nauber, D. Weik, L. Büttner, J. Czarske, „Vorrichtung und Messverfahren zur ortsaufgelösten in-situ Erfassung von Flüssigwasser auf einer Trägerstruktur sowie deren Verwendung in einem Brennstoffzellenstapel und in Plattenwärmeübertrager-Anwendungen“ Deutsches Patent- und Markenamt, 2021.

SCI-Publications in journals with peer review process

E. Scharf, J. Dremel, R. Kuschmierz, J. Czarske, “Video‐rate lensless endoscope with selfcalibration using wavefront shaping”, Optics Letters 45(13), 3629‐3632, 2020

S. Rothe, Q. Zhang, N. Koukourakis, J. Czarske, “Deep Learning for Computational Mode Decomposition in Optical Fibers”, Applied Sciences 10(4), 1367, 2020.

S. Rothe, N. Koukourakis, H. Radner, A. Lonnstrom, E. Jorswieck, J. Czarske, “Physical Layer Security in Multimode Fiber Optical Networks”, Scientific Reports 10(1), 1-11, 2020.

L. Büttner, M. Thümmler, J. Czarske, “Velocity measurements with structured light transmitted through a multimode optical fiber using digital optical phase conjugation”, Opt. Express 28, 8064-8075, 2020

F. Bürkle, F. Moyon, L. Feierabend, J. Wartmann, A. Heinzel, J. Czarske, L. Büttner, “Investigation and Equalisation of the Flow Distribution in a Fuel Cell Stack”, Journal of Power Sources, 2020

W. Wang, K. Philipp, J. Czarske, N. Koukourakis; Real-time monitoring of adaptive lenses with high tuning range and multiple degrees of freedom; Optics Letters, Vol. 45, Issue 2, pp. 272-275 (2020) •https://doi.org/10.1364/OL.45.0002722020, 2020

H. Zhang, D. Anders, M. Löser, S. Ihlenfeldt, J. Czarske, R. Kuschmierz, „Non-contact, bi-directional tool tip vibration measurement in CNC milling machines with a single optical sensor“, Mechanical Systems and Signal Processing, 2020

S. Shi, R. Kuschmierz, H. Zhang, J. Lin, J. Czarske, J. Qu, „Modeling, quantification, and mitigation of uncertainty propagation in two-step roundness measurements“, Measurement, 2020

Lemke, Florian; Weber, Pascal; Philipp, Katrin; Czarske, Juergen; Koukourakis, Nektarios; Wallrabe, Ulrike; Wapler, Matthias, “Piezo‐actuated adaptive prisms for continuously adjustable bi‐axial scanning", Smart Materials and Structures, 2020

Giuseppe Antonacci, Timon Beck, Alberto Bilenca, Jürgen Czarske, Kareem Elsayad, Jochen Guck. Kyoohyun Kim, Benedikt Krug, Francesca Palombo, Robert Prevedel, Giuliano Scarcelli, “Recent progress and current opinions in Brillouin Microscopy for life science Applications”, Biophysical Reviews, 2020

Felix Greiffenhagen, Jakob Woisetschläger, Johannes Gürtler, Jürgen Czarske,“Quantitative measurement of density fluctuations with a full‐field laser interferometric vibrometer”,Experiments in Fluids, 61, 9, 2020

R. Nauber, L. Büttner, J. Czarske, “Measurement uncertainty analysis of FPGA‐based realtime signal processing for ultrasound flow imaging”, Journal of Sensors and Sensor Systems (JSSS), 2020

C. Kupsch, L. Feierabend, R. Nauber, L. Büttner, J. Czarske, “Ultrasound super resolution flow measurement of suspensions in narrow channels”, IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control, 2020

Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen, “In situ measurement of the isoplanatic patch for imaging through intact bone”, Journal of Biophotonics, e202000160 (2020)

Aziz, Azaam; Pane, Stefano; Iacovacci, Veronica; Koukourakis, Nektarios; Czarske, Jürgen; Menciassi, Arianna; Medina‐Sánchez, Mariana; Schmidt, Oliver, "Medical Imaging of Microrobots: Towards In Vivo Applications", ACS Nano 14, 9, 10865–10893 (2020)

J. Gürtler, F. Greiffenhagen, J. Woisetschläger, R. Kuschmierz, J. Czarske, “Seedingless
measurement of density fluctuations and flow velocity using high‐speed holographic
interferometry in a swirl‐stabilized flame”, Optics and Lasers in Engineering, 2020

Invited talks at conferences (with proceedings)

B. Krug, N. Koukourakis, and J. Czarske "Fast measurement of mechanical properties with impulsive stimulated Brillouin microscopy (Invited Presentation by Juergen Popp)", Proc. SPIE 11359, Biomedical Spectroscopy, Microscopy, and Imaging, SPIE Photonics Europe, 2020

J. Czarske, S. Rothe, N. Koukourakis, “Computational Laser Metrology for Multimode Fiber Communication”, IEEE Photonics Conference – IPC, Annual Meeting of the IEEE Photonics Society, IPC was presented in a virtual format 29 September – 1 October 2020, Virtual Conference (Vancouver, Canada) 2020 (invited by Christina Lim, Australia)

International conferences (reviewed, with proceedings)

B.  Krug,  N.  Koukourakis,  J.  Czarske,  “Capabilities  of  impulsive  stimulated  Brillouin  microscopy for biomechanics”, 4th BioBrillouin Meeting, WG 3 Instrument Design &  Data Analysis, 9‐11 September 2020, Exeter, United Kingdom

Elias Scharf, Robert Kuschmierz, Nektarios Koukourakis, Jürgen Czarske, „Needle‐size  lensless  fiber  endoscope  for  optical  stretching  and  3D  imaging  with  cellular  resolution“, SPIE Photonics Europe, SPIE digital, 06‐10 April 2020

Wenjie  Wang,  Nektarios  Koukourakis,  Jürgen  Czarske.  "Piezo‐actuated  adaptive  elements  in  scanning  microscopy"  (SPIE  Digital  Conference  Presentation),  Unconventional  Optical  Imaging  II.  International  Society  for  Optics  and  Photonics,  11351: 113511D.  SPIE Photonics Europe, 06‐10 April 2020  

Elias Scharf, Nektarios Koukourakis, Robert Kuschmierz,  Jürgen Czarske, „Robust 4D  wavefront control through coherent fiber bundles for lensless endoscopy and optical  tweezing”, SPIE Photonics West, San Francisco, USA, SPIE digital, 2020 

B. Krug, N. Koukourakis, J. Czarske, “Fast measurement of mechanical properties with  impulsive stimulated Brillouin microscopy on hydrogels and beyond” Proceeding Paper  11242‐37, Elastography and Tissue Biomechanics VII, SPIE Photonics West, SPIE digital,  4 – 6 February 2020, San Francisco, USA 

T.  Wollmann,  E.  Koch,  J.  Lich,  M.  Vater,  R.  Kuschmierz,  C.  Schnabel,  J.  Czarske,  A.  Filippatos,  M.  Gude,  "Motion  blur  suppression  by  using  an  optical  derotator  for  deformation measurement of rotating components," Proc. SPIE 11380, Nondestructive  Characterization and  Monitoring  of  Advanced  Materials,  Aerospace,  Civil  Infrastructure,  and  Transportation IX, 1138016, California, USA, SPIE digital, 2020

Julian Lich, Tino Wollmann, Hao Zhang, Angelos Filippatos, Robert Kuschmierz, Maik  Gude, Jürgen Czarske, "Diffraction grating based measurement of the modal behavior  of  fast  rotating  composite  discs  (Conference  Presentation),"  Proc.  SPIE  11380,  Nondestructive Characterization and Monitoring of Advanced Materials, Aerospace,  Civil Infrastructure, and Transportation IX, 113800J, California, USA, SPIE digital, 2020

S  Junge, F Schmieder,  P Sasse,  J  Czarske, ML Torres‐Mapa, Alexander Heisterkamp,  “Holographic optogenetic stimulation with calcium imaging as an all‐optical  tool  for  cardiac  electrophysiological  studies”  (SPIE  Conference  Presentation),  Biomedical  Spectroscopy, Microscopy, and Imaging 11359, 1135917, SPIE digital, April 2020 

F. Schmieder; R. Habibey; V. Busskamp; L. Büttner; J. W. Czarske „Investigation of in  vitro  human  iPSC‐derived  neuronal  networks  using  holographic  stimulation”,  2020,  SPIE Photonics West 11227, Optogenetics and Optical Manipulation, 1‐6 February 2020,  San Francisco, USA 

National conferences (reviewed, with proceedings)

L. Grüter, R. Nauber, C. Kupsch, J. Czarske, „Compensation of Strong Aberrations with a Time Reversal Virtual Array for Ultrasound Imaging“, Sensor and Measurement Science
International (SMSI), 299 ‐ 300, 2020 (only proceeding, did not take place because of Covid‐19 virus pandemic)

Invited talks (at seminars/workshops)

J. Czarske, “ Digital holography in optogenetics: a new window on the brain ‐ Digitale
Holographie in der Optogenetik: Ein neues Fenster zum Gehirn”, Dresdner
Seniorenakademie für Wissenschaft und Kunst, 9 January 2020

J. Lich (as SPIE representative), J. Czarske, „Diffraction grating based measurement of the modal behavior of fast rotating composite discs”, Photonic Lunch Break, Max Planck School of Photonics, Jena, 27 April 2020

Book Chapters

J. Czarske, L. Büttner, “μ‐LDV”, in: “Encyclopedia of Microfluidics and Nanofluidics”,
Dongqing Li (Ed.), Springer 2015, Print ISBN 978‐1‐4614‐5488‐5, Online ISBN 978‐1‐4614‐
5491‐5

C. Kupsch, Ultraschallmessverfahren für komplexe Suspensionsströmungen in kleinen
Geometrien: Untersuchungen am Beispiel der Zink‐Luft‐Batterie, Dissertation, Shaker‐Verlag, Dresdner Berichte zur Messsystemtechnik Nr. 16, Aachen, 2020

Patent Application

S. Heitkam, R. Nauber, L. Büttner, C. Kupsch, J. Czarske, „Verfahren und Anordnung zur ortsspezifischen Charakterisierung der Phasenzusammensetzung sowie der Strömungsverhältnisse innerhalb eines Schaumvolumens”, submitted to the Deutsches Patent‐ und Markenamt

L Büttner, J Czarske, M Teich, N Koukourakis, „Arrangement and method for disturbance correction for imaging flow measuring processes”, US Patent App. 16/628,391

S. Rothe, Q. Zhang, N. Koukourakis, R. Kuschmierz, J. Czarske,
„Referenzfreie Modendekomposition mit einem Neuronalen Netz bei einer hochmodigen
Multimodefaser auf Basis reellwertiger Intensitätsverteilungen“, submitted to the Deutsches Patent‐ und Markenamt

R. Kuschmierz, J. Czarske, "Verfahren und Anordnung zur adaptierten Beleuchtung eines
Objekts mit Licht", submitted to Deutsches Patent‐ und Markenamt

L. Büttner, S. Heitkam, C. Kupsch, R. Nauber, J. Czarske: “Modellbasiertes Ultraschall‐ Messsystem für partikelbeladene Schäume “