ZIH Publications 2017
ZIH-IR-1756 | S. Parker, J. Mellor-Crummey, D. Ahn, H. Jagode, H. Brunst, S. Shende, A. Malony, D. Lecomber, J. DelSignore, R. Tschüter Performance Analysis and Debugging Tools at Scale In Chapman & Hall/CRC Computational Science, ISBN: 9781351999236, CRC Press, 2017 |
ZIH-IR-1755 | R. Dietrich, R. Tschüter, G. Juckeland, A. Knüpfer Analyzing Offloading Inefficiencies in Scalable Heterogeneous Applications In Vol. 10524, pages 457--476, 2017 |
ZIH-IR-1754 | B. Matthiesen, S. Pfennig, M. Bielert, T. Ilsche, A. Lonnstrom, T. Li, J. Cabrera, C. Scheunert, E. Franz, S. Santini, T. Strufe, E. Jorswieck, Wolfgang E. Nagel, G. Nguyen, F. Fitzek Secure and Energy-Efficient Interconnects for Board-to-Board Communication In DOI: 10.1109/ICUWB.2017.8250994, 2017 |
ZIH-IR-1753 | T. Ilsche, R. Schöne, M. Bielert, A. Gocht, D. Hackenberg lo2s - Multi-core System and Application Performance Analysis for Linux In pages 801-804, DOI: 10.1109/cluster.2017.116, 2017 |
ZIH-IR-1752 | H. Dennis, A. Ward, T. Balson, Y. Li, S. Slavin, S. Simms, H. Brunst High Performance Computing Enabled Simulation of the Food-Water-Energy System: Simulation of Intensively Managed Landscapes In DOI: 10.1145/3093338.3093381, ACM, 2017 |
ZIH-IR-1751 | S. Ghiasvand, F. Ciorba Event Pattern Identification in Anonymized System Logs 2017 |
ZIH-IR-1750 | S. Herres-Pawlis, J. Stanek, N. Sackers, F. Fink, M. Paul, L. Peters, R. Grunzke, A. Hoffmann Copper guanidinoquinoline complexes as entatic state models of electron transfer proteins In Chemistry – A European Journal, Vol. 23, 62, pages 15738--15745, ISSN: 1521-3765, DOI: 10.1002/chem.201703261, 2017 |
ZIH-IR-1749 | R. Tschüter, J. Ziegenbalg, B. Wesarg, M. Weber, C. Herold, S. Döbel, R. Brendel An LLVM Instrumentation Plug-in for Score-P In LLVM-HPC'17, pages 2:1--2:8, ISBN: 978-1-4503-5565-0, DOI: 10.1145/3148173.3148187, ACM, 2017 |
ZIH-IR-1748 | R. Brendel, B. Wesarg, R. Tschüter, M. Weber, T. Ilsche, S. Oeste Generic Library Interception for Improved Performance Measurement and Insight In ESPT '17, 2017 |
ZIH-IR-1747 | M. Weber, R. Brendel, M. Wagner, R. Dietrich, R. Tschüter, H. Brunst Visual Comparison of Trace Files in Vampir In ESPT '17, 2017 |
ZIH-IR-1746 | C. Herold, R.Tschüter Measuring I/O Behavior on Upcoming Systems with NVRAM 2017 |
ZIH-IR-1744 |
Y. Sastri, K. Feldhoff, J. Starruss, R. Jäkel, R. Müller-Pfefferkorn A Workflow for the Integral Performance Analysis of Cloud Applications Using Monitoring and Tracing Techniques In ICCBDC 2017, pages 73--78, ISBN: 978-1-4503-5343-4, DOI: 10.1145/3141128.3141132, ACM, 2017 |
ZIH-IR-1743 | M. Sourouri, E. Raknes, N. Reissmann, J. Langguth, D. Hackenberg, R. Schöne, P. Kjeldsberg Towards Fine-grained Dynamic Tuning of HPC Applications on Modern Multi-core Architectures In SC '17, pages 41:1--41:12, ISBN: 978-1-4503-5114-0, DOI: 10.1145/3126908.3126945, ACM, 2017 |
ZIH-IR-1742 | T. Karnagel, T. Ben-Nun, M. Werner, D. Habich, W. Lehner Big Data causing Big (TLB) Problems: Taming Random Memory Accesses on the GPU In Proceedings of the 13th International Workshop on Data Management on New Hardware, pages 6:1--6:10, ISSN: 978-1-4503-5025-9, DOI: 10.1145/3076113.3076115, 2017 |
ZIH-IR-1741 | J. Nava-Sedeno, H. Hatzikirou, R. Klages, A. Deutsch Cellular automaton models for time-correlated random walks: derivation and analysis In Scientific Reports, Vol. 7, 1, pages16952, ISSN: 2045-2322, 2017 |
ZIH-IR-1740 | O. Ostrenko, P. Incardona, R. Ramaswamy, L. Brusch, I. Sbalzarini pSSAlib: The partial-propensity stochastic chemical network simulator In PLoS Computational Biology, 2017 |
ZIH-IR-1739 | R. Apweiler, T. Beissbarth, M. Berthold, N. Bluthgen, Y. Burmeister, O. Dammann, A. Deutsch, F. Feuerhake, A. Franke, J. Hasenauer, S. Hoffmann, T. Höfer, P. Jansen, L. Kaderali, U. Klingmüller, I. Koch, O. Kohlbacher, L. Kuepfer, F. Lammert, D. Maier, N. Pfeifer, N. Radde, M. Rehm, I. Roeder, J. Saez-Rodriguez, U. Sax, B. Schmeck, A. Schuppert, B. Seilheimer, F. Theis, J. Vera-González, O. Wolkenhauer Whither Systems Medicine? In Experimental & Molecular Medicine, 2017 |
ZIH-IR-1738 | J. Castrillon, M. Lieber, S. Klüppelholz, M. Völp, N. Asmussen, U. Aßmann, F. Baader, C. Baier, G. Fettweis, J. Fröhlich, A. Goens, S. Haas, D. Habich, H. Härtig, M. Hasler, I. Huismann, T. Karnagel, S. Karol, A. Kumar, W. Lehner, L. Leuschner, S. Ling, S. Märcker, C. Menard, J. Mey, Wolfgang E. Nagel, B. Nöthen, R. Peñaloza, M. Raitza, J. Stiller, A. Ungethüm, A. Voigt, S. Wunderlich A Hardware/Software Stack for Heterogeneous Systems In IEEE Transactions on Multi-Scale Computing Systems, ISSN: 2332-7766, DOI: 10.1109/tmscs.2017.2771750, 2017 |
ZIH-IR-1737 | R. Grunzke, T. Adolph, C. Biardzki, A. Bode, T. Borst, H. Bungartz, A. Busch, A. Frank, C. Grimm, W. Hasselbring, A. Kazakova, A. Latif, F. Limani, M. Neumann, N. Tavares de Sousa, J. Tendel, I. Thomsen, K. Tochtermann, R. Müller-Pfefferkorn, Wolfgang E. Nagel Challenges in Creating a Sustainable Generic Research Data Infrastructure In Vol. 37, 2, 2017 |
ZIH-IR-1735 | J. Alfonso, K. Talkenberger, M. Seifert, B. Klink, A. Hawkins-Daarud, H. Hatzikirou, K. Swanson, A. Deutsch The biology and mathematical modelling of glioma invasion: a review In Journal of the Royal Society Interface, Vol. 14, 136, pages 20170490, DOI: 10.1098/rsif.2017.0490, 2017 |
ZIH-IR-1734 | F. Hoffeins, F. Ciorba, I. Banicescu Towards the Reproducibility of Using Dynamic Loop Scheduling Techniques in Scientific Applications 2017 |
ZIH-IR-1733 | K. Hoffmann, A. Voss-Böhme, J. Rink, L. Brusch A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns In Journal of The Royal Society Interface, Vol. 14, 135, pages 20170466, ISSN: 1742-5689, DOI: 10.1098/rsif.2017.0466, The Royal Society, 2017 |
ZIH-IR-1732 | M. Zinner, K. Rink, R. Jäkel, K. Feldhoff, R. Grunzke, T. Fischer, R. Song, M. Walther, T. Jejkal, O. Kolditz, Wolfgang E. Nagel Automatic Documentation of the Development of Numerical Models for Scientific Applications using Specific Revision Control In pages 18-27, ISBN: 978-1-61208-590-6, ISSN: 2308-4235, 2017 |
ZIH-IR-1731 |
J. Castrillon, T. Kuo, H. Riel, M. Lieber |
ZIH-IR-1730 |
D. Reher, B. Klink, A. Deutsch, A. Voss-Böhme |
ZIH-IR-1729 |
C. Hinrichs, M. Ingargiola, T. Käubler, S. Löck, A. Temme, A. Köhn-Luque, A. Deutsch, O. Vovk, O. Stasyk, L. Kunz-Schughart |
ZIH-IR-1728 |
M. Lieber, Wolfgang E. Nagel |
ZIH-IR-1727 |
R. Grunzke, V. Hartmann, T. Jejkal, A. Prabhune, S. Herres-Pawlis, A. Hoffmann, A. Deicke, T. Schrade, H. Herold, G. Meinel, R. Stotzka, Wolfgang E. Nagel |
ZIH-IR-1725 |
R. Grunzke, M. Neumann, T. Ilsche, V. Hartmann, T. Jejkal, R. Stotzka, A. Knüpfer, Wolfgang E. Nagel |
ZIH-IR-1724 |
I. Huismann, M. Lieber, J. Stiller, J. Fröhlich |
ZIH-IR-1723 |
C. Herold, O. Krzikalla, A. Knüpfer |
ZIH-IR-1722 |
F. Hoffeins, F. Ciorba, I. Banicescu |
ZIH-IR-1721 |
R. Grunzke, F. Jug, B. Schuller, R. Jäkel, G. Myers, Wolfgang E. Nagel |
ZIH-IR-1720 |
J. Frenzel, K. Feldhoff, R. Jäkel, R. Müller-Pfefferkorn |
ZIH-IR-1719 |
S. Gesing, R. Dooley, M. Pierce, J. Krüger, R. Grunzke, S. Herres-Pawlis, A. Hoffmann |
ZIH-IR-1718 |
D. Molka, R. Schöne, D. Hackenberg, Wolfgang E. Nagel |
ZIH-IR-1717 |
T. Buder, A. Deutsch, M. Seifert, A. Voss-Böhme |
ZIH-IR-1716 |
M. Chadha, T. Ilsche, M. Bielert, Wolfgang E. Nagel |
ZIH-IR-1715 |
M. Schroschk, W. Braun, K. Kulshreshtha |
ZIH-IR-1714 |
T. Karnagel, T. Ben-Nun, M. Werner |
ZIH-IR-1713 |
P. Kjeldsberg, A. Gocht, M. Gerndt, L. Říha, J. Schuchart, U. Mian |
ZIH-IR-1712 |
J. Stolle, F. Schmitt, M. Wagner, J. Doleschal, H. Brunst |
ZIH-IR-1711 |
R. Grunzke, J. Krüger, R. Jäkel, Wolfgang E. Nagel, S. Herres-Pawlis, A. Hoffmann |
ZIH-IR-1708 |
A. Giesler, M. Czekala, B. Hagemeier, Richard Grunzke |
ZIH-IR-1707 |
D. Schemala, D. Schlesinger, P. Winkler, H. Herold, G. Meinel |
ZIH-IR-1705 | J. Schuchart, M. Gerndt, P. Kjeldsberg, M. Lysaght, D. Horák, L.Říha, A. Gocht, M. Sourouri, M. Kumaraswamy, A. Chowdhury, M. Jahre, K. Diethelm, O. Bouizi, U. Mian, J. Kruvzík, R. Sojka, M. Beseda, V. Kannan, Z. Bendifallah, D. Hackenberg, Wolfgang E. Nagel The READEX formalism for automatic tuning for energy efficiency In Computing, pages 1--19, ISSN: 1436-5057, DOI: 10.1007/s00607-016-0532-7, 2017 |
ZIH-IR-1704 | P. Maini, H. Othmer, A. Deutsch Obituary: Hans Meinhardt (1938–2016) In Bulletin of Mathematical Biology, Vol. 79, 2, pages 383–388, DOI: 10.1007/s11538-016-0243-4, 2017 |
ZIH-IR-1703 | K. Meyer, O. Ostrenko, G. Bourantas, H. Morales-Navarrete, N. Porat-Shliom, F. Segovia-Miranda, H. Nonaka, A. Ghaemi, J. Verbavatz, L. Brusch, I. Sbalzarini, Y. Kalaidzidis, R. Weigert, M. Zerial A predictive 3D multi-scale model of biliary fluid dynamics in the liver lobule In Cell Systems, 2017 |
ZIH-IR-1702 | J. Nava-Sedeno, H. Hatzikirou, F. Peruani, A. Deutsch Extracting cellular automaton rules from physical Langevin equation models for single and collective cell migration In J. Math. Biol., DOI: 10.1007/s00285-017-1106-9, 2017 |
ZIH-IR-1701 |
L. Zimmermann, R. Grunzke, J. Krüger |